Evidence map›Paper›PMID 35710332›Full record

ArticleBMC genomics2022

Identification of the CIPK-CBL family gene and functional characterization of CqCIPK14 gene under drought stress in quinoa.

Zhu Xiaolin, Wang Baoqiang, Wang Xian, Wei Xiaohong

Open access · goldAbstract read
In one paragraph

Article in BMC genomics, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 24 papers.

0numbers the graph read from it
0cells of the map it votes in
24citing papers in PubMed
5.3field-weighted citation impact, top 4% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

24 citing papers in PubMed, 39 citations in OpenAlex.

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  15. Genome-Wide Identification and Analysis ofInternational journal of molecular sciences · 2023
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  18. Review
  19. Genome-wide discovery of CBL genes inForestry research · 2023
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  20. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors at 1 institution in 1 country.

Zhu XiaolinCollege of Agronomy, Gansu Agricultural University, Lanzhou, 730070, China.
Wang BaoqiangCollege of Agronomy, Gansu Agricultural University, Lanzhou, 730070, China.
Wang XianCollege of Agronomy, Gansu Agricultural University, Lanzhou, 730070, China.
Wei XiaohongCollege of Agronomy, Gansu Agricultural University, Lanzhou, 730070, China. weixh@gsau.edu.cn.
Gansu Agricultural University · CN

Funding

National Natural Science Foundation of China 32060401Natural Science Foundation of Gansu Province 21JR7RA808the Fostering Foundation for the Excellent PH.D. Dissertation of Gansu Agricultural University YB2021001
6 · The paper itself

Abstract

backgroundCalcineurin-like Protein (CBL) and CBL interacting protein kinase (CIPK) play a key role in plant signal transduction and response to various environmental stimuli. Quinoa, as an important plant with high nutritional value, can meet the basic nutritional needs of human Cash crop, is also susceptible to abiotic stress. However, CBL-CIPK in quinoa have not been reported.

resultsIn this study, 16 CBL and 41 CIPK genes were identified in quinoa. CBL-CIPK gene shows different intron-exon gene structure and motif, they participate in different biological processes, and form a complex regulatory network between CBL-CIPK proteins. Many cis-regulatory element associated with ABA and drought have been found. The expression patterns of CBL-CIPK showed different expression patterns in various abiotic stresses and tissues. RT-qPCR showed that most members of these two gene families were involved in drought regulation of quinoa, in particular, the expression levels of CqCIPK11, CqCIPK15, CqCIPK37 and CqCBL13 increased significantly under drought stress.

conclusionsThe structures and functions of the CBL-CIPK family in quinoa were systematically explored. Many CBL-CIPK may play vital roles in the regulation of organ development, growth, and responses to abiotic stresses. This research has great significance for the functional characterisation of the quinoa CBL-CIPK family and our understanding of the CBL-CIPK family in higher plants.

Indexed as

Chenopodium quinoaDroughtsGene Expression Regulation, PlantHumansPhylogenyPlant ProteinsPlantsProtein KinasesStress, PhysiologicalPlant ProteinsProtein KinasesCBL-CIPKDrought stressGene expressionGenome-wide analysisQuinoa

Identifiers

PMID35710332
PMCPMC9204864
OpenAlexW4283018742

What Socratic holds

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the Socratic graph.