Evidence map›Paper›PMID 35723313›Full record

ArticleCurrent issues in molecular biology2022

Multigene Panel Sequencing Reveals Cancer-Specific and Common Somatic Mutations in Colorectal Cancer Patients: An Egyptian Experience.

Amira Salah El-Din Youssef, Mohamed A Abdel-Fattah, Mai M Lotfy, Auhood Nassar, Mohamed Abouelhoda, Ahmed O Touny, Zeinab K Hassan, Mohammed Mohey Eldin, Abeer A Bahnassy, Hussein Khaled and 1 more

Open access · goldAbstract read
In one paragraph

Article in Current issues in molecular biology, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 11 papers, 2 of them syntheses that pooled it.

0numbers the graph read from it
0cells of the map it votes in
11citing papers in PubMed, 2 pooled it
1.6field-weighted citation impact, top 17% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

11 citing papers in PubMed, 2 syntheses or guidelines pooled it, 12 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

11 authors at 2 institutions in 1 country.

Amira Salah El-Din YoussefCancer Biology Department, National Cancer Institute, Cairo University, Cairo 11796, Egypt.ORCID 0000-0003-3091-691X
Mohamed A Abdel-FattahBiotechnology Department, Faculty of Agriculture, Ain-Shams University, Cairo 11566, Egypt.ORCID 0000-0002-8294-2979
Mai M LotfyCancer Biology Department, National Cancer Institute, Cairo University, Cairo 11796, Egypt.ORCID 0000-0001-8282-8773
Auhood NassarCancer Biology Department, National Cancer Institute, Cairo University, Cairo 11796, Egypt.
Mohamed AbouelhodaFaculty of Engineering, Cairo University, Cairo 12613, Egypt.
Ahmed O TounySurgical Oncology Department, National Cancer Institute, Cairo University, Cairo 11796, Egypt.ORCID 0000-0003-4069-138X
Zeinab K HassanCancer Biology Department, National Cancer Institute, Cairo University, Cairo 11796, Egypt.
Mohammed Mohey EldinTropical Medicine Department, El Kasr Al-Aini, Cairo University, Cairo 11562, Egypt.
Abeer A BahnassyMolecular Pathology Department, National Cancer Institute, Cairo University, Cairo 11796, Egypt.
Hussein KhaledMedical Oncology Department, National Cancer Institute, Cairo University, Cairo 11796, Egypt.
Abdel Rahman N ZekriCancer Biology Department, National Cancer Institute, Cairo University, Cairo 11796, Egypt.ORCID 0000-0003-3939-0416
Cairo University · EGAin Shams University · EG

Funding

Science and Technology Development Fund Project ID: 41902.
6 · The paper itself

Abstract

This study aims at identifying common pathogenic somatic mutations at different stages of colorectal carcinogenesis in Egyptian patients. Our cohort included colonoscopic biopsies collected from 120 patients: 20 biopsies from patients with inflammatory bowel disease, 38 from colonic polyp patients, and 62 from patients with colorectal cancer. On top of this, the cohort included 20 biopsies from patients with non-specific mild to moderated colitis. Targeted DNA sequencing using a customized gene panel of 96 colorectal related genes running on the Ion Torrent NGS technology was used to process the samples. Our results revealed that 69% of all cases harbored at least one somatic mutation. Fifty-seven genes were found to carry 232 somatic non-synonymous variants. The most frequently pathogenic somatic mutations were localized in

Indexed as

colorectal cancerEgyptianmultigene sequencingsomatic mutations

Identifiers

PMID35723313
PMCPMC8947625
OpenAlexW4220991522

What Socratic holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the Socratic graph.