Evidence map›Paper›PMID 35732685›Full record

ArticleScientific reports2022

Characterization of the RNA-dependent RNA polymerase from Chikungunya virus and discovery of a novel ligand as a potential drug candidate.

Marjorie C L C Freire, Luis G M Basso, Luis F S Mendes, Nathalya C M R Mesquita, Melina Mottin, Rafaela S Fernandes, Lucca R Policastro, Andre S Godoy, Igor A Santos, Uriel E A Ruiz and 7 more

Open access · goldAbstract read
In one paragraph

Article in Scientific reports, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 12 papers.

0numbers the graph read from it
0cells of the map it votes in
12citing papers in PubMed
3.6field-weighted citation impact, top 7% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

12 citing papers in PubMed, 19 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

17 authors at 9 institutions in 1 country.

Marjorie C L C FreireInstitute of Physics of Sao Carlos, University of Sao Paulo, Sao Carlos, SP, Brazil.
Luis G M BassoPhysical Sciences Laboratory, State University of Northern Rio de Janeiro Darcy Ribeiro (UENF), Campos dos Goytacazes, RJ, Brazil.
Luis F S MendesDepartament of Physics, Ribeirao Preto School of Philosophy, Science and Literature, University of Sao Paulo, Ribeirao Preto, SP, Brazil.
Nathalya C M R MesquitaInstitute of Physics of Sao Carlos, University of Sao Paulo, Sao Carlos, SP, Brazil.
Melina MottinLaboratory for Molecular Modeling and Drug Design, Labmol, Faculty of Pharmacy, Universidade Federal de Goiás, Goiânia, GO, Brazil.
Rafaela S FernandesInstitute of Physics of Sao Carlos, University of Sao Paulo, Sao Carlos, SP, Brazil.
Lucca R PolicastroInstitute of Physics of Sao Carlos, University of Sao Paulo, Sao Carlos, SP, Brazil.
Andre S GodoyInstitute of Physics of Sao Carlos, University of Sao Paulo, Sao Carlos, SP, Brazil.
Igor A SantosInstitute of Biomedical Sciences, Federal University of Uberlandia, Uberlandia, MG, Brazil.
Uriel E A RuizInstitute of Biomedical Sciences, Federal University of Uberlandia, Uberlandia, MG, Brazil.
Icaro P CarusoInstitute of Biosciences, Humanities and Exact Sciences (Ibilce), Sao Paulo State University (Unesp), Campus Sao Jose do Rio Preto, Sao Jose do Rio Preto, SP, Brazil.
Bruna K P SousaLaboratory for Molecular Modeling and Drug Design, Labmol, Faculty of Pharmacy, Universidade Federal de Goiás, Goiânia, GO, Brazil.
Ana C G JardimInstitute of Biomedical Sciences, Federal University of Uberlandia, Uberlandia, MG, Brazil.
Fabio C L AlmeidaInstitute of Medical Biochemistry (IBqM) Leopoldo de Meis, National Center of Nuclear Magnetic Resonance Jiri Jonas, Federal University of Rio de Janeiro, Rio de Janeiro, RJ, Brazil.
Laura H V G GilInstituto Aggeu Magalhaes (IAM-FIOCRUZ), Recife, PE, Brazil.
Carolina H AndradeLaboratory for Molecular Modeling and Drug Design, Labmol, Faculty of Pharmacy, Universidade Federal de Goiás, Goiânia, GO, Brazil.
Glaucius OlivaInstitute of Physics of Sao Carlos, University of Sao Paulo, Sao Carlos, SP, Brazil. oliva@ifsc.usp.br.
Universidade de São Paulo · BRUniversidade Federal de Goiás · BRUniversidade Federal de São Carlos · BRUniversidade Federal de Uberlândia · BRFundação Oswaldo Cruz · BRNational Institute of Science and Technology for Structural Biology and Bioimaging · BRState University of Norte Fluminense · BRUniversidade Estadual Paulista (Unesp) · BRUniversidade Federal do Rio de Janeiro · BR

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Chikungunya virus (CHIKV) is the causative agent of Chikungunya fever, an acute febrile and arthritogenic illness with no effective treatments available. The development of effective therapeutic strategies could be significantly accelerated with detailed knowledge of the molecular components behind CHIKV replication. However, drug discovery is hindered by our incomplete understanding of their main components. The RNA-dependent RNA-polymerase (nsP4-CHIKV) is considered the key enzyme of the CHIKV replication complex and a suitable target for antiviral therapy. Herein, the nsP4-CHIKV was extensively characterized through experimental and computational biophysical methods. In the search for new molecules against CHIKV, a compound designated LabMol-309 was identified as a strong ligand of the nsp4-CHIKV and mapped to bind to its active site. The antiviral activity of LabMol-309 was evaluated in cellular-based assays using a CHIKV replicon system and a reporter virus. In conclusion, this study highlights the biophysical features of nsP4-CHIKV and identifies a new compound as a promising antiviral agent against CHIKV infection.

Indexed as

Chikungunya FeverChikungunya virusAntiviral AgentsHumansLigandsRNARNA-Dependent RNA PolymeraseVirus ReplicationAntiviral AgentsLigandsRNARNA-Dependent RNA Polymerase

Identifiers

PMID35732685
PMCPMC9217121
OpenAlexW4283322936

What Socratic holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the Socratic graph.