Evidence map›Paper›PMID 35761237›Full record

ArticleBMC biology2022

Highly distinct genetic programs for peripheral nervous system formation in chordates.

Rafath Chowdhury, Agnès Roure, Yann le Pétillon, Hélène Mayeur, Vladimir Daric, Sébastien Darras

Open access · goldAbstract read
In one paragraph

Article in BMC biology, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 4 papers.

0numbers the graph read from it
0cells of the map it votes in
4citing papers in PubMed
3.1field-weighted citation impact, top 7% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

4 citing papers in PubMed, 28 citations in OpenAlex.

  1. Article
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  4. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 1 institution in 1 country.

Rafath ChowdhurySorbonne Université, CNRS, Biologie Intégrative des Organismes Marins (BIOM), F-66650, Banyuls-sur-Mer, France. rafath.chowdhury@obs-banyuls.fr.
Agnès RoureSorbonne Université, CNRS, Biologie Intégrative des Organismes Marins (BIOM), F-66650, Banyuls-sur-Mer, France.
Yann le PétillonSorbonne Université, CNRS, Biologie Intégrative des Organismes Marins (BIOM), F-66650, Banyuls-sur-Mer, France.
Hélène MayeurSorbonne Université, CNRS, Biologie Intégrative des Organismes Marins (BIOM), F-66650, Banyuls-sur-Mer, France.
Vladimir DaricSorbonne Université, CNRS, Biologie Intégrative des Organismes Marins (BIOM), F-66650, Banyuls-sur-Mer, France.
Sébastien DarrasSorbonne Université, CNRS, Biologie Intégrative des Organismes Marins (BIOM), F-66650, Banyuls-sur-Mer, France. sebastien.darras@obs-banyuls.fr.ORCID 0000-0002-0590-0062
Centre National de la Recherche Scientifique · FR

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

backgroundVertebrates develop their peripheral nervous system (PNS) from transient unique embryonic structures, the neural crest, and the ectodermal placodes that are located at the border of the forming central nervous system. By contrast, in the invertebrate chordates, amphioxus and ascidians, a large part of the PNS originates at the opposite of the embryo, in the ventral ectoderm. In both groups, a biphasic mechanism regulates ventral PNS formation: high BMP levels specify a neurogenic territory within which glutamatergic epidermal sensory neuron formation is controlled by the Notch pathway. Given these similarities and the phylogenetic relationships within chordates, it is likely that ventral PNS is an ancestral feature in chordates and that it has been lost in vertebrates.

resultsIn order to get insights into the molecular control of ventral PNS formation and to test the hypothesis of their homology and potential contribution to the emergence of vertebrate PNS, we undertook a close comparison of ventral PNS formation in the ascidian Phallusia mammillata and the amphioxus Branchiostoma lanceolatum. Using timed RNA-seq series, we identified novel markers of the ventral PNS during different phases of its development in both species. By extensively determining the expression of paralogous and orthologous genes, we observed that only a minority of genes have a shared expression in the ventral PNS. However, a large fraction of ventral PNS orthologous genes are expressed in the dorsally forming PNS of vertebrates.

conclusionsOur work has significantly increased the molecular characterization of ventral PNS formation in invertebrate chordates. The low observed conservation of gene expression in the ventral PNS suggests that the amphioxus and ascidian ventral PNS are either not homologous, or alternatively extensive drift has occurred in their regulatory mechanisms following a long period (600 My) of separate evolution and accelerated evolution in the ascidian lineage. The homology to genes expressed in the dorsally forming PNS of vertebrates suggests that ancestral sensory neurons gene networks have been redeployed in vertebrates.

Indexed as

LanceletsUrochordataAnimalsEctodermGene Expression Regulation, DevelopmentalPeripheral Nervous SystemPhylogenyVertebratesAmphioxusAscidianChordatesEvoDevoGene regulatory networkPeripheral nervous systemsensory neurons

Identifiers

PMID35761237
PMCPMC9238270
OpenAlexW4283585121

What Socratic holds

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LicenceCC BY
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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the Socratic graph.