Evidence map›Paper›PMID 35767561›Full record

ArticlePLoS biology2022

The origin of RNA interference: Adaptive or neutral evolution?

Alessandro Torri, Johannes Jaeger, Thomas Pradeu, Maria-Carla Saleh

Open access · goldAbstract read
In one paragraph

Article in PLoS biology, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 19 papers.

0numbers the graph read from it
0cells of the map it votes in
19citing papers in PubMed
2.9field-weighted citation impact, top 8% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

19 citing papers in PubMed, 35 citations in OpenAlex.

  1. Article
  2. Article
  3. Article
  4. Review
  5. Article
  6. Article
  7. Article
  8. Understanding developmental system drift.Development (Cambridge, England) · 2024
    Review
  9. Review
  10. Challenges and Opportunities Arising from Host-International journal of molecular sciences · 2024
    Review
  11. Identification of an active RNAi pathway inProceedings of the National Academy of Sciences of the United States of America · 2024
    Article
  12. Article
  13. Article
  14. A Comprehensive Study of MicroRNA in Baculoviruses.International journal of molecular sciences · 2024
    Review
  15. Review
  16. Disruption of theRNA (New York, N.Y.) · 2023
    Article
  17. Review
  18. Article
  19. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors at 2 institutions in 2 countries.

Alessandro TorriVirus & RNA interference Unit, Department of Virology, Institut Pasteur, CNRS UMR 3569, Université Paris Cité, Paris, France.ORCID 0000-0001-6340-5572
Johannes JaegerComplexity Science Hub (CSH) Vienna, Vienna, Austria.
Thomas PradeuImmunoConcEpT, CNRS UMR 5164, University of Bordeaux, Bordeaux, France.
Maria-Carla SalehVirus & RNA interference Unit, Department of Virology, Institut Pasteur, CNRS UMR 3569, Université Paris Cité, Paris, France.ORCID 0000-0001-8593-4117
Centre National de la Recherche Scientifique · FRComplexity Science Hub · AT

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

The origin of RNA interference (RNAi) is usually explained by a defense-based hypothesis, in which RNAi evolved as a defense against transposable elements (TEs) and RNA viruses and was already present in the last eukaryotic common ancestor (LECA). However, since RNA antisense regulation and double-stranded RNAs (dsRNAs) are ancient and widespread phenomena, the origin of defensive RNAi should have occurred in parallel with its regulative functions to avoid imbalances in gene regulation. Thus, we propose a neutral evolutionary hypothesis for the origin of RNAi in which qualitative system drift from a prokaryotic antisense RNA gene regulation mechanism leads to the formation of RNAi through constructive neutral evolution (CNE). We argue that RNAi was already present in the ancestor of LECA before the need for a new defense system arose and that its presence helped to shape eukaryotic genomic architecture and stability.

Indexed as

EukaryotaRNA, Double-StrandedDNA Transposable ElementsGenetic DriftRNA InterferenceRNA, Small InterferingDNA Transposable ElementsRNA, Double-StrandedRNA, Small Interfering

Identifiers

PMID35767561
PMCPMC9275709
OpenAlexW4283731859

What Socratic holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the Socratic graph.