Evidence map›Paper›PMID 35771169›Full record

ArticleThe EMBO journal2022

Acyl chain selection couples the consumption and synthesis of phosphoinositides.

David Barneda, Vishnu Janardan, Izabella Niewczas, Daniel M Collins, Sabina Cosulich, Jonathan Clark, Len R Stephens, Phillip T Hawkins

Open access · hybridAbstract read
In one paragraph

Article in The EMBO journal, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 18 papers.

0numbers the graph read from it
0cells of the map it votes in
18citing papers in PubMed
2.3field-weighted citation impact, top 11% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

18 citing papers in PubMed, 29 citations in OpenAlex.

  1. Article
  2. Review
  3. Article
  4. Article
  5. Article
  6. Article
  7. Review
  8. Article
  9. Article
  10. Differentiating human phospholipase ABiochimica et biophysica acta. Molecular and cell biology of lipids · 2024
    Article
  11. Review
  12. Article
  13. Beyond Fluidity: The Role of Lipid Unsaturation in Membrane Function.Cold Spring Harbor perspectives in biology · 2023
    Review
  14. Article
  15. PI(4,5)P2: signaling the plasma membrane.The Biochemical journal · 2022
    Article
  16. Article
  17. Article
  18. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors at 3 institutions in 4 countries.

David BarnedaSignalling Programme, Babraham Institute, Cambridge, UK.ORCID 0000-0002-4436-4100
Vishnu JanardanCellular Organization and Signalling, National Centre for Biological Sciences, Bangalore, India.
Izabella NiewczasSignalling Programme, Babraham Institute, Cambridge, UK.
Daniel M CollinsSignalling Programme, Babraham Institute, Cambridge, UK.
Sabina CosulichProjects, Oncology R&D, AstraZeneca, Cambridge, UK.
Jonathan ClarkSignalling Programme, Babraham Institute, Cambridge, UK.
Len R Stephens *Signalling Programme, Babraham Institute, Cambridge, UK.ORCID 0000-0002-2771-3487
Phillip T Hawkins *Signalling Programme, Babraham Institute, Cambridge, UK.ORCID 0000-0002-6979-0464
Babraham Institute · GBAstraZeneca (United Kingdom) · GBNational Centre for Biological Sciences · IN

Funding

Biotechnology and Biological Sciences Research Council BBS/E/B/000C0413Biotechnology and Biological Sciences Research Council BBS/E/B/000C0415
6 · The paper itself

Abstract

Phosphoinositides (PIPn) in mammalian tissues are enriched in the stearoyl/arachidonoyl acyl chain species ("C38:4"), but its functional significance is unclear. We have used metabolic tracers (isotopologues of inositol, glucose and water) to study PIPn synthesis in cell lines in which this enrichment is preserved to differing relative extents. We show that PIs synthesised from glucose are initially enriched in shorter/more saturated acyl chains, but then rapidly remodelled towards the C38:4 species. PIs are also synthesised by a distinct 're-cycling pathway', which utilises existing precursors and exhibits substantial selectivity for the synthesis of C38:4-PA and -PI. This re-cycling pathway is rapidly stimulated during receptor activation of phospholipase-C, both allowing the retention of the C38:4 backbone and the close coupling of PIPn consumption to its resynthesis, thus maintaining pool sizes. These results suggest that one property of the specific acyl chain composition of PIPn is that of a molecular code, to facilitate 'metabolic channelling' from PIP2 to PI via pools of intermediates (DG, PA and CDP-DG) common to other lipid metabolic pathways.

Indexed as

LipogenesisPhosphatidylinositolsAnimalsGlucoseMammalsGlucosePhosphatidylinositolsCDP-DGCDSDGKH218OPI

Identifiers

PMID35771169
PMCPMC9475507
OpenAlexW4283719898

What Socratic holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the Socratic graph.