Evidence mapPaperPMID 35790710Full record

ArticleNature communications2022

Spatial regulation of AMPK signaling revealed by a sensitive kinase activity reporter.

Danielle L Schmitt, Stephanie D Curtis, Anne C Lyons, Jin-Fan Zhang, Mingyuan Chen, Catherine Y He, Sohum Mehta, Reuben J Shaw, Jin Zhang

Open access · goldAbstract read
In one paragraph

Article in Nature communications, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 53 papers.

0numbers the graph read from it
0cells of the map it votes in
53citing papers in PubMed
6.0field-weighted citation impact, top 2% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

53 citing papers in PubMed, 73 citations in OpenAlex.

  1. Article
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  5. A Constellation of Fluorescent Biosensors to Illuminate the Galaxy of Protein Kinases.Chembiochem : a European journal of chemical biology · 2026
    Review
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  7. Article
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  11. Review
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  15. Two novel red-FRET ERK bosensors in the 670-720 nm range.Journal of biological engineering · 2025
    Article
  16. Article
  17. Article
  18. Review
  19. Article
  20. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors at 2 institutions in 1 country.

Danielle L SchmittDepartment of Pharmacology, University of California San Diego, La Jolla, CA, USA.
Stephanie D CurtisMolecular and Cell Biology Laboratory, The Salk Institute for Biological Studies, La Jolla, CA, USA.
Anne C LyonsDepartment of Bioengineering, University of California San Diego, La Jolla, CA, USA.
Jin-Fan ZhangDepartment of Bioengineering, University of California San Diego, La Jolla, CA, USA.
Mingyuan ChenDepartment of Bioengineering, University of California San Diego, La Jolla, CA, USA.ORCID 0000-0002-0103-374X
Catherine Y HeDepartment of Pharmacology, University of California San Diego, La Jolla, CA, USA.
Sohum MehtaDepartment of Pharmacology, University of California San Diego, La Jolla, CA, USA.ORCID 0000-0003-4764-8579
Reuben J ShawMolecular and Cell Biology Laboratory, The Salk Institute for Biological Studies, La Jolla, CA, USA.ORCID 0000-0002-1555-8977
Jin ZhangDepartment of Pharmacology, University of California San Diego, La Jolla, CA, USA. jzhang32@ucsd.edu.ORCID 0000-0001-7145-7823
University of California San Diego · USSalk Institute for Biological Studies · US

Funding

Viral Vector Core (VVC)P30CA014195 · NCI · SALK INSTITUTE FOR BIOLOGICAL STUDIES · 1985 to 2025
$37.5M
Contemporary Approaches to Cancer Cell Signaling and CommunicationT32CA009523 · UNIVERSITY OF CALIFORNIA, SAN DIEGO · 1985 to 2025
$3.0M
UCSD/SDSU IRACDAK12GM068524 · UNIVERSITY OF CALIFORNIA, SAN DIEGO · 2003 to 2025
$2.7M
Project 3: Identifying transcriptional driver genes and targeting transcription in TSCP01CA120964 · BRIGHAM AND WOMEN'S HOSPITAL · 2025 to 2025
$2.1M
Decoding And Targeting The LKB1-AMPK Signaling Pathway In CancerR35CA220538 · SALK INSTITUTE FOR BIOLOGICAL STUDIES · 2025 to 2025
$1.1M
Live-cell Activity Architecture in CancerR35CA197622 · UNIVERSITY OF CALIFORNIA, SAN DIEGO · 2025 to 2025
$948k
AMPK Regulation of ACE2 in Endothelial Health and DiseaseR01HL162302 · UNIVERSITY OF CALIFORNIA, SAN DIEGO · 2025 to 2025
$657k
Signal Transduction by PI3K/mTORR01DE030497 · UNIVERSITY OF CALIFORNIA, SAN DIEGO · 2025 to 2025
$483k
NCI NIH HHS P01 CA120964NCI NIH HHS P30 CA014195NCI NIH HHS R35 CA197622NCI NIH HHS R35 CA220538NCI NIH HHS T32 CA009523NHLBI NIH HHS R01 HL162302NIDCR NIH HHS R01 DE030497NIGMS NIH HHS K12 GM068524
6 · The paper itself

Abstract

AMP-activated protein kinase (AMPK) is a master regulator of cellular energetics which coordinates metabolism by phosphorylating a plethora of substrates throughout the cell. But how AMPK activity is regulated at different subcellular locations for precise spatiotemporal control over metabolism is unclear. Here we present a sensitive, single-fluorophore AMPK activity reporter (ExRai AMPKAR), which reveals distinct kinetic profiles of AMPK activity at the mitochondria, lysosome, and cytoplasm. Genetic deletion of the canonical upstream kinase liver kinase B1 (LKB1) results in slower AMPK activity at lysosomes but does not affect the response amplitude at lysosomes or mitochondria, in sharp contrast to the necessity of LKB1 for maximal cytoplasmic AMPK activity. We further identify a mechanism for AMPK activity in the nucleus, which results from cytoplasmic to nuclear shuttling of AMPK. Thus, ExRai AMPKAR enables illumination of the complex subcellular regulation of AMPK signaling.

Indexed as

AMP-Activated Protein KinasesSignal TransductionCell NucleusCytoplasmPhosphorylationAMP-Activated Protein Kinases

Identifiers

PMID35790710
PMCPMC9256702
OpenAlexW4283814502

What Socratic holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the Socratic graph.