Evidence map›Paper›PMID 35793636›Full record

ArticleCell reports2022

Intersectional mapping of multi-transmitter neurons and other cell types in the brain.

Jian Xu, Andrew Jo, Raina P DeVries, Sercan Deniz, Suraj Cherian, Idris Sunmola, Xingqi Song, John J Marshall, Katherine A Gruner, Tanya L Daigle and 4 more

Open access · goldAbstract read
In one paragraph

Article in Cell reports, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 18 papers.

0numbers the graph read from it
0cells of the map it votes in
18citing papers in PubMed
6.6field-weighted citation impact, top 4% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

18 citing papers in PubMed, 26 citations in OpenAlex.

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  12. Prevalent co-release of glutamate and GABA throughout the mouse brain.bioRxiv : the preprint server for biology · 2024
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

14 authors at 4 institutions in 2 countries.

Jian XuDepartments of Ophthalmology and Neuroscience, Feinberg School of Medicine, Northwestern University, Chicago, IL 60611, USA; Department of Neuroscience, Feinberg School of Medicine, Northwestern University, Chicago, IL 60611, USA.
Andrew JoDepartments of Ophthalmology and Neuroscience, Feinberg School of Medicine, Northwestern University, Chicago, IL 60611, USA.
Raina P DeVriesDepartment of Organismal Biology and Anatomy, The University of Chicago, Chicago, IL 60637, USA.
Sercan DenizDepartments of Ophthalmology and Neuroscience, Feinberg School of Medicine, Northwestern University, Chicago, IL 60611, USA.
Suraj CherianDepartments of Ophthalmology and Neuroscience, Feinberg School of Medicine, Northwestern University, Chicago, IL 60611, USA.
Idris SunmolaDepartments of Ophthalmology and Neuroscience, Feinberg School of Medicine, Northwestern University, Chicago, IL 60611, USA.
Xingqi SongSchool of Medicine, Shanghai Jiao Tong University, Shanghai 200240, China.
John J MarshallDepartment of Neuroscience, Feinberg School of Medicine, Northwestern University, Chicago, IL 60611, USA.
Katherine A GrunerMouse Histology and Phenotyping Laboratory, Northwestern University, Chicago, IL 60611, USA.
Tanya L DaigleAllen Institute for Brain Science, Seattle, WA 98109, USA.
Anis ContractorDepartment of Neuroscience, Feinberg School of Medicine, Northwestern University, Chicago, IL 60611, USA.
Talia N LernerDepartment of Neuroscience, Feinberg School of Medicine, Northwestern University, Chicago, IL 60611, USA.
Hongkui ZengAllen Institute for Brain Science, Seattle, WA 98109, USA.
Yongling ZhuDepartments of Ophthalmology and Neuroscience, Feinberg School of Medicine, Northwestern University, Chicago, IL 60611, USA; Department of Neuroscience, Feinberg School of Medicine, Northwestern University, Chicago, IL 60611, USA. Electronic address: yongling-zhu@northwestern.edu.
Northwestern University · USAllen Institute for Brain Science · USShanghai Jiao Tong University · CNUniversity of Chicago · US

Funding

Generation of novel cell type specific mouse genetic toolsU19MH114830 · NIMH · ALLEN INSTITUTE · PI ANDERSON, DAVID J, PACHTER, LIOR S · 2017 to 2021
$64.7M
Signal Processing in the Inner RetinaR01EY018204 · NEI · NORTHWESTERN UNIVERSITY AT CHICAGO · PI DEVRIES, STEVEN H, ZHU, YONGLING · 2007 to 2024
$6.4M
The role of glutamate receptors in compulsive and perseverative behaviorR01MH099114 · NIMH · NORTHWESTERN UNIVERSITY AT CHICAGO · PI CONTRACTOR, ANIS · 2012 to 2022
$4.5M
Cell types and functional circuitry in the retinaR01EY030169 · NEI · NORTHWESTERN UNIVERSITY AT CHICAGO · PI YONGLING ZHU · 2019 to 2026
$3.1M
Regulation of kainate receptor expression in cone bipolar cellsR01EY032506 · NEI · NORTHWESTERN UNIVERSITY AT CHICAGO · PI CONTRACTOR, ANIS, DEVRIES, STEVEN H · 2022 to 2025
$1.7M
Visual Sciences T32T32EY025202 · NEI · NORTHWESTERN UNIVERSITY AT CHICAGO · PI Gregory William Schwartz · 2015 to 2026
$1.4M
Generation and characterization of novel and highly specific neruonal subtype traR01MH085500 · NIMH · ALLEN INSTITUTE · PI NAGY, ANDRAS, ZENG, HONGKUI · 2008 to 2011
$1.2M
Intersectional genetic dissection of inner retinal circuitsF31EY031985 · NEI · NORTHWESTERN UNIVERSITY AT CHICAGO · PI JO, ANDREW OH · 2020 to 2022
$127k
NEI NIH HHS F31 EY031985NEI NIH HHS R01 EY018204NEI NIH HHS R01 EY030169NEI NIH HHS R01 EY032506NEI NIH HHS T32 EY025202NIMH NIH HHS R01 MH099114NIMH NIH HHS U19 MH114830
6 · The paper itself

Abstract

Recent developments in intersectional strategies have greatly advanced our ability to precisely target brain cell types based on unique co-expression patterns. To accelerate the application of intersectional genetics, we perform a brain-wide characterization of 13 Flp and tTA mouse driver lines and selected seven for further analysis based on expression of vesicular neurotransmitter transporters. Using selective Cre driver lines, we created more than 10 Cre/tTA combinational lines for cell type targeting and circuit analysis. We then used VGLUT-Cre/VGAT-Flp combinational lines to identify and map 30 brain regions containing neurons that co-express vesicular glutamate and gamma-aminobutyric acid (GABA) transporters, followed by tracing their projections with intersectional viral vectors. Focusing on the lateral habenula (LHb) as a target, we identified glutamatergic, GABAergic, or co-glutamatergic/GABAergic innervations from ∼40 brain regions. These data provide an important resource for the future application of intersectional strategies and expand our understanding of the neuronal subtypes in the brain.

Indexed as

HabenulaNeuronsAnimalsMiceMice, TransgenicVesicular Glutamate Transport ProteinsVesicular Glutamate Transport Proteinsbrain mappingCP: Neuroscienceintersectional strategymulti-transmitter neuronsthe lateral habenula

Identifiers

PMID35793636
PMCPMC9290751
OpenAlexW4284706549

What Socratic holds

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LicenceCC BY-NC-ND
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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the Socratic graph.