Evidence map›Paper›PMID 35806465›Full record

ReviewInternational journal of molecular sciences2022

SAGA-Dependent Histone H2Bub1 Deubiquitination Is Essential for Cellular Ubiquitin Balance during Embryonic Development.

Farrah El-Saafin, Didier Devys, Steven A Johnsen, Stéphane D Vincent, László Tora

Open access · goldAbstract readReview
In one paragraph

Review in International journal of molecular sciences, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 12 papers.

0numbers the graph read from it
0cells of the map it votes in
12citing papers in PubMed
1.4field-weighted citation impact, top 19% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

12 citing papers in PubMed, 18 citations in OpenAlex.

  1. Review
  2. Article
  3. Article
  4. Peculiarities of theInternational journal of molecular sciences · 2025
    Article
  5. Review
  6. Bioinformatic analysis of the role of USP22 expression in hepatocellular carcinoma.International journal of clinical and experimental pathology · 2025
    Article
  7. Histone H2B ubiquitylation: Connections to transcription and effects on chromatin structure.Biochimica et biophysica acta. Gene regulatory mechanisms · 2024
    Review
  8. Article
  9. UPS writes a new saga of SAGA.Biochimica et biophysica acta. Gene regulatory mechanisms · 2023
    Review
  10. Article
  11. Article
  12. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors at 3 institutions in 3 countries.

Farrah El-SaafinOlivia Newton-John Cancer Research Institute, Melbourne 3095, Australia.
Didier DevysInstitut de Génétique et de Biologie Moléculaire et Cellulaire, 67404 Illkirch, France.
Steven A JohnsenRobert Bosch Center for Tumor Diseases, 70376 Stuttgart, Germany.
Stéphane D VincentInstitut de Génétique et de Biologie Moléculaire et Cellulaire, 67404 Illkirch, France.ORCID 0000-0003-1638-9615
László ToraInstitut de Génétique et de Biologie Moléculaire et Cellulaire, 67404 Illkirch, France.ORCID 0000-0001-7398-2250
Centre National de la Recherche Scientifique · FROlivia Newton-John Cancer Wellness & Research Centre · AURobert Bosch Hospital · DE

Funding

Mechanisms of chromatin regulation of transcriptionR35GM139564 · NIGMS · OHIO STATE UNIVERSITY · PI POIRIER, MICHAEL GUY · 2021 to 2025
$3.6M
Understanding how two related mammalian histone acetyl transferase co-activators, SAGA and ATAC, differentially regulate chromatin dynamics and transcriptionR01GM131626 · NIGMS · OHIO STATE UNIVERSITY · PI POIRIER, MICHAEL GUY · 2019 to 2021
$1.3M
Agence Nationale de la Recherche ANR-20-CE12-0014-02Agence Nationale de la Recherche EpiCAST-19-CE12-0029-01Agence Nationale de la Recherche PICen-19-CE11-0003-02Fondation pour la Recherche Médicale EQU-2021-03012631NIH HHS R01GM131626-01NIH HHS R35GM139564
6 · The paper itself

Abstract

Ubiquitin (ub) is a small, highly conserved protein widely expressed in eukaryotic cells. Ubiquitination is a post-translational modification catalyzed by enzymes that activate, conjugate, and ligate ub to proteins. Substrates can be modified either by addition of a single ubiquitin molecule (monoubiquitination), or by conjugation of several ubs (polyubiquitination). Monoubiquitination acts as a signaling mark to control diverse biological processes. The cellular and spatial distribution of ub is determined by the opposing activities of ub ligase enzymes, and deubiquitinases (DUBs), which remove ub from proteins to generate free ub. In mammalian cells, 1-2% of total histone H2B is monoubiquitinated. The SAGA (Spt Ada Gcn5 Acetyl-transferase) is a transcriptional coactivator and its DUB module removes ub from H2Bub1. The mammalian SAGA DUB module has four subunits, ATXN7, ATXN7L3, USP22, and ENY2.

Indexed as

HistonesUbiquitinAnimalsEmbryonic DevelopmentMammalsMiceProtein Processing, Post-TranslationalUbiquitinationHistonesUbiquitinATXN7L3DUBembryoshistone H2BmonoubiquitylationmouseSAGA (Spt Ada Gcn5 acetyl-transferase)UbcubiquitinUSP22

Identifiers

PMID35806465
PMCPMC9267394
OpenAlexW4284685532

What Socratic holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the Socratic graph.