Evidence map›Paper›PMID 35848907›Full record

ArticleNucleic acids research2022

Insights into innate immune activation via PS-ASO-protein-TLR9 interactions.

Adam J Pollak, Luyi Zhao, Timothy A Vickers, Ian J Huggins, Xue-Hai Liang, Stanley T Crooke

Open access · goldAbstract read
In one paragraph

Article in Nucleic acids research, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 31 papers.

0numbers the graph read from it
0cells of the map it votes in
31citing papers in PubMed
2.5field-weighted citation impact, top 10% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

31 citing papers in PubMed, 32 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 1 institution in 1 country.

Adam J PollakIonis Pharmaceuticals, Inc. Carlsbad, CA 92010, USA.ORCID 0000-0003-3071-6635
Luyi ZhaoIonis Pharmaceuticals, Inc. Carlsbad, CA 92010, USA.
Timothy A VickersIonis Pharmaceuticals, Inc. Carlsbad, CA 92010, USA.
Ian J HugginsIonis Pharmaceuticals, Inc. Carlsbad, CA 92010, USA.
Xue-Hai LiangIonis Pharmaceuticals, Inc. Carlsbad, CA 92010, USA.ORCID 0000-0001-9333-8622
Stanley T CrookeIonis Pharmaceuticals, Inc. Carlsbad, CA 92010, USA.ORCID 0000-0002-4260-1520
Ionis Pharmaceuticals (United States) · US

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Non-CpG PS-ASOs can activate the innate immune system, leading to undesired outcomes. This response can vary-in part-as a function of 2'modifications and sequence. Here we investigated the molecular steps involved in the varied effects of PS-ASOs on the innate immune system. We found that pro-inflammatory PS-ASOs require TLR9 signaling based on the experimental systems used. However, the innate immunity of PS-ASOs does not correlate with their binding affinity with TLR9. Furthermore, the innate immune responses of pro-inflammatory PS-ASOs were reduced by coincubation with non-inflammatory PS-ASOs, suggesting that both pro-inflammatory and non-inflammatory PS-ASOs can interact with TLR9. We show that the kinetics of the PS-ASO innate immune responses can vary, which we speculate may be due to the existence of alternative PS-ASO binding sites on TLR9, leading to full, partial, or no activation of the pathway. In addition, we found that several extracellular proteins, including HMGB1, S100A8 and HRG, enhance the innate immune responses of PS-ASOs. Reduction of the binding affinity by reducing the PS content of PS-ASOs decreased innate immune responses, suggesting that PS-ASO-protein complexes may be sensed by TLR9. These findings thus provide critical information concerning how PS-ASOs can interact with and activate TLR9.

Indexed as

Immunity, InnateOligonucleotides, AntisensePhosphorothioate OligonucleotidesToll-Like Receptor 9Calgranulin AEndocytosisHistidine-Rich GlycoproteinHMGB1 ProteinHumansProteinsCalgranulin AHistidine-Rich GlycoproteinHMGB1 ProteinHMGB1 protein, humanOligonucleotides, AntisensePhosphorothioate OligonucleotidesProteinsS100A8 protein, humanTLR9 protein, humanToll-Like Receptor 9

Identifiers

PMID35848907
PMCPMC9371907
OpenAlexW4285733331

What Socratic holds

Textmetadata
LicenceCC BY-NC
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the Socratic graph.