Evidence map›Paper›PMID 35850241›Full record

ArticleJournal of lipid research2022

Skin fibroblast metabolomic profiling reveals that lipid dysfunction predicts the severity of Friedreich's ataxia.

Dezhen Wang, Elaine S Ho, M Grazia Cotticelli, Peining Xu, Jill S Napierala, Lauren A Hauser, Marek Napierala, Blanca E Himes, Robert B Wilson, David R Lynch and 1 more

Open access · goldAbstract read
In one paragraph

Article in Journal of lipid research, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 24 papers.

0numbers the graph read from it
0cells of the map it votes in
24citing papers in PubMed
2.9field-weighted citation impact, top 8% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

24 citing papers in PubMed, 29 citations in OpenAlex.

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  17. Hypermetabolic state is associated with circadian rhythm disruption in mouse and human cancer cells.Proceedings of the National Academy of Sciences of the United States of America · 2024
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

11 authors at 4 institutions in 1 country.

Dezhen WangCenter for Excellence in Environmental Toxicology, Department of Systems Pharmacology and Translational Therapeutics, University of Pennsylvania, Philadelphia, Pennsylvania, USA.
Elaine S HoCenter for Excellence in Environmental Toxicology, Department of Systems Pharmacology and Translational Therapeutics, University of Pennsylvania, Philadelphia, Pennsylvania, USA.
M Grazia CotticelliDepartment of Pathology and Laboratory Medicine, Children's Hospital of Philadelphia, Philadelphia, Pennsylvania, USA.
Peining XuCenter for Excellence in Environmental Toxicology, Department of Systems Pharmacology and Translational Therapeutics, University of Pennsylvania, Philadelphia, Pennsylvania, USA.
Jill S NapieralaUniversity of Alabama at Birmingham, Department of Biochemistry and Molecular Genetics, UAB Stem Cell Institute, Birmingham, Alabama, USA.
Lauren A HauserDepartment of Neurology and Pediatrics, Children's Hospital of Philadelphia, Abramson Research, Philadelphia, Pennsylvania, USA.
Marek NapieralaUniversity of Alabama at Birmingham, Department of Biochemistry and Molecular Genetics, UAB Stem Cell Institute, Birmingham, Alabama, USA.
Blanca E HimesDepartment of Biostatistics, Epidemiology and Informatics, University of Pennsylvania, Philadelphia, Pennsylvania, USA.
Robert B WilsonDepartment of Pathology and Laboratory Medicine, Children's Hospital of Philadelphia, Philadelphia, Pennsylvania, USA.
David R LynchDepartment of Neurology and Pediatrics, Children's Hospital of Philadelphia, Abramson Research, Philadelphia, Pennsylvania, USA.
Clementina MesarosCenter for Excellence in Environmental Toxicology, Department of Systems Pharmacology and Translational Therapeutics, University of Pennsylvania, Philadelphia, Pennsylvania, USA. Electronic address: mesaros@upenn.edu.
Children's Hospital of Philadelphia · USTranslational Therapeutics (United States) · USUniversity of Alabama at Birmingham · USUniversity of Pennsylvania · US

Funding

Translational Research Support CoreP30ES013508 · NIEHS · UNIVERSITY OF PENNSYLVANIA · PI A. Clementina Mesaros · 2006 to 2026
$35.3M
Lipid metabolism disruption as a consequence of mitochondrial dysfunction in Friedreich's ataxiaR21NS116315 · NINDS · UNIVERSITY OF PENNSYLVANIA · PI MESAROS, A. CLEMENTINA · 2020 to 2020
$486k
NIEHS NIH HHS P30 ES013508NINDS NIH HHS R21 NS116315
6 · The paper itself

Abstract

Friedreich's ataxia (FRDA) is an autosomal recessive neurodegenerative disorder caused by a triplet guanine-adenine-adenine (GAA) repeat expansion in intron 1 of the FXN gene, which leads to decreased levels of the frataxin protein. Frataxin is involved in the formation of iron-sulfur (Fe-S) cluster prosthetic groups for various metabolic enzymes. To provide a better understanding of the metabolic status of patients with FRDA, here we used patient-derived fibroblast cells as a surrogate tissue for metabolic and lipidomic profiling by liquid chromatography-high resolution mass spectrometry. We found elevated HMG-CoA and β-hydroxybutyrate-CoA levels, implying dysregulated fatty acid oxidation, which was further demonstrated by elevated acyl-carnitine levels. Lipidomic profiling identified dysregulated levels of several lipid classes in FRDA fibroblast cells when compared with non-FRDA fibroblast cells. For example, levels of several ceramides were significantly increased in FRDA fibroblast cells; these results positively correlated with the GAA repeat length and negatively correlated with the frataxin protein levels. Furthermore, stable isotope tracing experiments indicated increased ceramide synthesis, especially for long-chain fatty acid-ceramides, in FRDA fibroblast cells compared with ceramide synthesis in healthy control fibroblast cells. In addition, PUFA-containing triglycerides and phosphatidylglycerols were enriched in FRDA fibroblast cells and negatively correlated with frataxin levels, suggesting lipid remodeling as a result of FXN deficiency. Altogether, we demonstrate patient-derived fibroblast cells exhibited dysregulated metabolic capabilities, and their lipid dysfunction predicted the severity of FRDA, making them a useful surrogate to study the metabolic status in FRDA.

Indexed as

Friedreich Ataxia3-Hydroxybutyric AcidAdenineCarnitineCeramidesCoenzyme AFibroblastsGuanineHumansIronPhosphatidylglycerolsSulfurTriglycerides3-Hydroxybutyric AcidAdenineCarnitineCeramidesCoenzyme AGuanineIronPhosphatidylglycerolsSulfurTriglyceridesceramidesfatty acids oxidationfrataxinlipidomicslipid remodelingneurodegenerative disordersphospholipidsstable isotope tracingtriglyceridestriplet repeat expansion

Identifiers

PMID35850241
PMCPMC9399481
OpenAlexW4285600032

What Socratic holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the Socratic graph.