Evidence map›Paper›PMID 35858314›Full record

ArticleProceedings of the National Academy of Sciences of the United States of America2022

Single-molecule analysis of actin filament debranching by cofilin and GMF.

Johnson Chung, Bruce L Goode, Jeff Gelles

Open access · greenAbstract read
In one paragraph

Article in Proceedings of the National Academy of Sciences of the United States of America, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 13 papers.

0numbers the graph read from it
0cells of the map it votes in
13citing papers in PubMed
4.8field-weighted citation impact, top 5% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

13 citing papers in PubMed, 18 citations in OpenAlex.

  1. Article
  2. Review
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  10. Review
  11. Article
  12. Mechanisms of actin disassembly and turnover.The Journal of cell biology · 2023
    Review
  13. Single-molecule analysis of actin filament debranching by cofilin and GMF.Proceedings of the National Academy of Sciences of the United States of America · 2022
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

3 authors at 1 institution in 1 country.

Johnson ChungDepartment of Biochemistry, Brandeis University, Waltham, MA 02454.ORCID 0000-0002-4043-4028
Bruce L GoodeDepartment of Biology, Brandeis University, Waltham, MA 02454.ORCID 0000-0002-6443-5893
Jeff GellesDepartment of Biochemistry, Brandeis University, Waltham, MA 02454.ORCID 0000-0001-7910-3421
Brandeis University · US

Funding

Single-molecule visualization of transcription regulation mechanismsR01GM081648 · NIGMS · BRANDEIS UNIVERSITY · PI JEFF GELLES · 2007 to 2026
$7.4M
Molecular and cellular mechanisms regulating actin dynamicsR35GM134895 · NIGMS · BRANDEIS UNIVERSITY · PI Bruce L Goode · 2020 to 2026
$7.3M
HHS | NIH | National Institute of General Medical Sciences (NIGMS) R01GM081648HHS | NIH | National Institute of General Medical Sciences (NIGMS) R35GM134895NIGMS NIH HHS R01 GM081648NIGMS NIH HHS R35 GM134895
6 · The paper itself

Abstract

Eukaryotic cells contain branched actin networks that are essential for endocytosis, motility, and other key cellular processes. These networks, which are formed by filamentous actin and the Arp2/3 complex, must subsequently be debranched to allow network remodeling and to recycle the Arp2/3 complex. Debranching appears to be catalyzed by two different members of the actin depolymerizing factor homology protein family: cofilin and glial maturation factor (GMF). However, their mechanisms of debranching are only partially understood. Here, we used single-molecule fluorescence imaging of Arp2/3 complex and actin filaments under physiological ionic conditions to observe debranching by GMF and cofilin. We demonstrate that cofilin, like GMF, is an authentic debrancher independent of its filament-severing activity and that the debranching activities of the two proteins are additive. While GMF binds directly to the Arp2/3 complex, cofilin selectively accumulates on branch-junction daughter filaments in tropomyosin-decorated networks just prior to debranching events. Quantitative comparison of debranching rates with the known kinetics of cofilin-actin binding suggests that cofilin occupancy of a particular single actin site at the branch junction is sufficient to trigger debranching. In rare cases in which the order of departure could be resolved during GMF- or cofilin-induced debranching, the Arp2/3 complex left the branch junction bound to the pointed end of the daughter filament, suggesting that both GMF and cofilin can work by destabilizing the mother filament-Arp2/3 complex interface. Taken together, these observations suggest that GMF and cofilin promote debranching by distinct yet complementary mechanisms.

Indexed as

Actin Depolymerizing FactorsGlia Maturation FactorActin CytoskeletonActin-Related Protein 2-3 ComplexActinsMicroscopy, FluorescenceSingle Molecule ImagingActin Depolymerizing FactorsActin-Related Protein 2-3 ComplexActinsGlia Maturation Factoractin depolymerizing factor homologyArp2/3 complexbranched actin networksglial maturation factortropomyosin

Identifiers

PMID35858314
PMCPMC9304009
OpenAlexW4285004799

What Socratic holds

Textmetadata
LicenceCC BY-NC-ND
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the Socratic graph.