Evidence map›Paper›PMID 35879525›Full record

ArticleNature microbiology2022

Stage-specific transcription activator ESB1 regulates monoallelic antigen expression in Trypanosoma brucei.

Lara López-Escobar, Benjamin Hänisch, Clare Halliday, Midori Ishii, Bungo Akiyoshi, Samuel Dean, Jack Daniel Sunter, Richard John Wheeler, Keith Gull

Open access · hybridAbstract read
In one paragraph

Article in Nature microbiology, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 20 papers.

0numbers the graph read from it
0cells of the map it votes in
20citing papers in PubMed
5.6field-weighted citation impact, top 3% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

20 citing papers in PubMed, 39 citations in OpenAlex.

  1. Microbiology spectrum · 2026
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  4. A factor integrating transcription and repression of surface antigen genes in African trypanosomes.Proceedings of the National Academy of Sciences of the United States of America · 2026
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  17. Subcellular protein localisation ofWellcome open research · 2023
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  20. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors at 3 institutions in 1 country.

Lara López-EscobarSir William Dunn School of Pathology, University of Oxford, Oxford, UK.ORCID http://orcid.org/0000-0002-0196-8764
Benjamin HänischSir William Dunn School of Pathology, University of Oxford, Oxford, UK.
Clare HallidaySir William Dunn School of Pathology, University of Oxford, Oxford, UK.
Midori IshiiDepartment of Biochemistry, University of Oxford, Oxford, UK.
Bungo AkiyoshiDepartment of Biochemistry, University of Oxford, Oxford, UK.ORCID http://orcid.org/0000-0001-6010-394X
Samuel DeanSir William Dunn School of Pathology, University of Oxford, Oxford, UK.ORCID http://orcid.org/0000-0002-4792-2198
Jack Daniel SunterDepartment of Biological and Medical Sciences, Oxford Brookes University, Oxford, UK. jsunter@brookes.ac.uk.ORCID http://orcid.org/0000-0002-2836-9622
Richard John WheelerPeter Medawar Building for Pathogen Research, University of Oxford, Oxford, UK. richard.wheeler@ndm.ox.ac.uk.ORCID http://orcid.org/0000-0002-4270-8360
Keith GullSir William Dunn School of Pathology, University of Oxford, Oxford, UK.
University of Oxford · GBOxford Brookes University · GBUniversity of Warwick · GB

Funding

Wellcome Trust 104627Wellcome Trust 108445Wellcome Trust 210622Wellcome Trust 210622/Z/18/ZWellcome Trust 211075Wellcome Trust 211075/Z/18/Z
6 · The paper itself

Abstract

Variant surface glycoprotein (VSG) coats bloodstream form Trypanosoma brucei parasites, and monoallelic VSG expression underpins the antigenic variation necessary for pathogenicity. One of thousands of VSG genes is transcribed by RNA polymerase I in a singular nuclear structure called the expression site body (ESB), but how monoallelic VSG transcription is achieved remains unclear. Using a localization screen of 153 proteins we found one, ESB-specific protein 1 (ESB1), that localized only to the ESB and is expressed only in VSG-expressing life cycle stages. ESB1 associates with DNA near the active VSG promoter and is necessary for VSG expression, with overexpression activating inactive VSG promoters. Mechanistically, ESB1 is necessary for recruitment of a subset of ESB components, including RNA polymerase I, revealing that the ESB has separately assembled subdomains. Because many trypanosomatid parasites have divergent ESB1 orthologues yet do not undergo antigenic variation, ESB1 probably represents an important class of transcription regulators.

Indexed as

Trypanosoma brucei bruceiAntigenic VariationMembrane GlycoproteinsRNA Polymerase ITranscription FactorsVariant Surface Glycoproteins, TrypanosomaMembrane GlycoproteinsRNA Polymerase ITranscription FactorsVariant Surface Glycoproteins, Trypanosoma

Identifiers

PMID35879525
PMCPMC9352583
OpenAlexW4287509943

What Socratic holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the Socratic graph.