ArticleBMC plant biology2022
Genome-wide identification and characterization of GATA family genes in wheat.
Article in BMC plant biology, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 30 papers.
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30 citing papers in PubMed, 56 citations in OpenAlex.
- Whole-genome analysis reveals the tandem duplication of Cannabis sativa L. GATA and their stress-responsive expression during seed germination.BMC plant biology · 2026Article
- Systematic identification, characterization, and expression analysis of rice strubbelig-receptor family genes associated with fluroxypyr-meptyl and oxyfluorfen metabolism.Journal, genetic engineering & biotechnology · 2026Article
- Genome-wide identification of the GATA transcription factor family in ten Cucurbitaceae species and expression analysis of ClGATA genes in watermelon stress responses.BMC genomics · 2026Article
- Genome-Wide Identification ofGenes · 2025Article
- Genome-Wide Identification and Evolutionary Analysis of the GATA Transcription Factor Family in Nitrogen-Fixing Legumes.Plants (Basel, Switzerland) · 2025Article
- The CGA1-SNAT regulatory module potentially contributes to cytokinin-mediated melatonin biosynthesis and drought tolerance in wheat.BMC plant biology · 2025Article
- Identification and analysis of the GATA gene family in onion (Allium cepa L.) in response to chromium and salt stress.BMC genomics · 2025Article
- Genome-wide characterization and expression analysis of the GATA transcription factor family in response to salt and drought stress in barley (Frontiers in plant science · 2025Article
- Genome-wide identification ofFrontiers in genetics · 2025Article
- An integrated analysis of miRNA and mRNA expressions in soybean response to boron stress.PloS one · 2025Article
- Genome-wide identification, phylogenetic and expression pattern analysis of GATA gene family inFrontiers in plant science · 2025Article
- Comparative analysis of the GATA transcription factors in sevenFrontiers in plant science · 2025Article
- Untargeted metabolomic and transcriptomic analysis in spring and durum wheat reveals potential mechanisms associated with the early stem solidness phenotype and resistance to wheat stem sawfly.Frontiers in plant science · 2025Article
- Comparative analysis of amino acid sequence level in plant GATA transcription factors.Scientific reports · 2024Article
- Genome-Wide Identification and Expression Pattern Analysis of GATA Gene Family in Orchidaceae.Genes · 2024Article
- GATA transcription factor in common bean: A comprehensive genome-wide functional characterization, identification, and abiotic stress response evaluation.Plant molecular biology · 2024Article
- The Putative GATA Transcription FactorLife (Basel, Switzerland) · 2024Article
- Genome-wide characterization and expression analysis of GATA transcription factors under combination of light wavelengths and drought stress in potato.Plant direct · 2024Article
- Genome-wide identification of GATA transcription factor family and the effect of different light quality on the accumulation of terpenoid indole alkaloids in Uncaria rhynchophylla.Plant molecular biology · 2024Article
- Identification and expression profiling ofFrontiers in plant science · 2024Article
Corrections and comments
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Authors and funding
5 authors at 1 institution in 1 country.
Funding
No grant is acknowledged in the PubMed record.
Abstract
backgroundTranscription factors GATAs were a member of zinc finger protein, which could bind DNA regulatory regions to control expression of target genes, thus influencing plant growth and development either in normal condition or environmental stresses. Recently, GATA genes have been found and functionally characterized in a number of plant species. However, little information of GATA genes were annotated in wheat.
resultsIn the current study, 79 GATA genes were identified in wheat, which were unevenly located on 21 chromosomes. According to the analysis of phylogenetic tree and functional domain structures, TaGATAs were classified into four subfamilies (I, II, III, and IV), consist of 35, 21, 12, and 11 genes, respectively. Meanwhile, the amino acids of 79 TaGATAs exhibited apparent difference in four subfamilies according to GATA domains comparison, gene structures and conserved motif analysis. We then analyze the gene duplication and synteny between the genomes of wheat and Arabidopsis, rice and barley, which provided insights into evolutionary characteristics. In addition, expression patterns of TaGATAs were analyzed, and they showed obvious difference in diverse tissues and abiotic stresses.
conclusionIn general, these results provide useful information for future TaGATA gene function analysis, and it helps to better understand molecular breeding and stress response in wheat.
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