Evidence map›Paper›PMID 35902675›Full record

ArticleScientific reports2022

Cross-reactive immunity against SARS-CoV-2 N protein in Central and West Africa precedes the COVID-19 pandemic.

Jannie Pedersen, Ismaël Hervé Koumakpayi, Giorgi Babuadze, Mariana Baz, Oumar Ndiaye, Oumar Faye, Cheikh Tidiane Diagne, Ndongo Dia, Maedeh Naghibosadat, Allison McGeer and 13 more

Open access · goldAbstract read
In one paragraph

Article in Scientific reports, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 17 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
17citing papers in PubMed, 1 pooled it
3.0field-weighted citation impact, top 7% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

17 citing papers in PubMed, 1 synthesis or guideline pooled it, 31 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

23 authors at 10 institutions in 6 countries.

Jannie PedersenDépartement de Microbiologie-Infectiologie et Immunologie, Université Laval, Quebec City, Canada.
Ismaël Hervé KoumakpayiCentre Hospitalier Universitaire de Libreville, Libreville, Gabon.
Giorgi BabuadzeBiological Sciences Platform, University of Toronto, Sunnybrook Research Institute at Sunnybrook Health Sciences Centre, Toronto, Canada.
Mariana BazDépartement de Microbiologie-Infectiologie et Immunologie, Université Laval, Quebec City, Canada.
Oumar NdiayeInstitut Pasteur de Dakar, Dakar, Senegal.
Oumar FayeInstitut Pasteur de Dakar, Dakar, Senegal.
Cheikh Tidiane DiagneInstitut Pasteur de Dakar, Dakar, Senegal.
Ndongo DiaInstitut Pasteur de Dakar, Dakar, Senegal.
Maedeh NaghibosadatBiological Sciences Platform, University of Toronto, Sunnybrook Research Institute at Sunnybrook Health Sciences Centre, Toronto, Canada.
Allison McGeerDepartment of Laboratory Medicine and Pathobiology, University of Toronto, Toronto, Canada.
Samira MuberakaBiological Sciences Platform, University of Toronto, Sunnybrook Research Institute at Sunnybrook Health Sciences Centre, Toronto, Canada.
Irène P MoukandjaCentre Hospitalier Universitaire de Libreville, Libreville, Gabon.
Stella NdidiCentre Hospitalier Universitaire de Libreville, Libreville, Gabon.
Carlos B TauilLaboratory of Immunology and Inflammation, University of Brasilia, Brasilia, Brazil.
Jean-Bernard Lekana-DoukiUnité d'Evolution Epidémiologie et Résistances Parasitaires, Centre Interdisciplinaire de Recherches Médicales de Franceville, Franceville, Gabon.
Cheikh LoucoubarInstitut Pasteur de Dakar, Dakar, Senegal.
Ousmane FayeInstitut Pasteur de Dakar, Dakar, Senegal.
Amadou SallInstitut Pasteur de Dakar, Dakar, Senegal.
Kelly G MagalhãesLaboratory of Immunology and Inflammation, University of Brasilia, Brasilia, Brazil.
Nina WeisDepartment of Infectious Diseases, Copenhagen University Hospital, Hvidovre, Denmark.
Robert KozakBiological Sciences Platform, University of Toronto, Sunnybrook Research Institute at Sunnybrook Health Sciences Centre, Toronto, Canada.
Gary P KobingerGalveston National Laboratory, University of Texas Medical Branch, Galveston, TX, USA.
Hugues Fausther-BovendoDépartement de Microbiologie-Infectiologie et Immunologie, Université Laval, Quebec City, Canada. faustlbv@gmail.com.
Institut Pasteur de Dakar · SNSunnybrook Health Science Centre · CALibreville Hospital · GAUniversidade de Brasília · BRUniversité Laval · CAAdvanced Pharma · USCentre International de Recherches Médicales de Franceville · GAThe University of Texas Medical Branch at Galveston · USUniversity Health Network · CAUniversity of Copenhagen · DK

Funding

CIHR 170629CIHR 439999
6 · The paper itself

Abstract

Early predictions forecasted large numbers of severe acute respiratory syndrome coronavirus (SARS-CoV-2) cases and associated deaths in Africa. To date, Africa has been relatively spared. Various hypotheses were postulated to explain the lower than anticipated impact on public health in Africa. However, the contribution of pre-existing immunity is yet to be investigated. In this study, the presence of antibodies against SARS-CoV-2 spike (S) and nucleocapsid (N) proteins in pre-pandemic samples from Africa, Europe, South and North America was examined by ELISA. The protective efficacy of N specific antibodies isolated from Central African donors was tested by in vitro neutralization and in a mouse model of SARS-CoV-2 infection. Antibodies against SARS-CoV-2 S and N proteins were rare in all populations except in Gabon and Senegal where N specific antibodies were prevalent. However, these antibodies failed to neutralize the virus either in vitro or in vivo. Overall, this study indicates that cross-reactive immunity against SARS-CoV-2 N protein was present in Africa prior to the pandemic. However, this pre-existing humoral immunity does not impact viral fitness in rodents suggesting that other human immune defense mechanisms could be involved. In Africa, seroprevalence studies using the N protein are over-estimating SARS-CoV-2 circulation.

Indexed as

COVID-19AnimalsAntibodies, NeutralizingAntibodies, ViralHumansMicePandemicsSARS-CoV-2SenegalSeroepidemiologic StudiesSpike Glycoprotein, CoronavirusAntibodies, NeutralizingAntibodies, ViralSpike Glycoprotein, Coronavirusspike protein, SARS-CoV-2

Identifiers

PMID35902675
PMCPMC9333058
OpenAlexW4288429575

What Socratic holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the Socratic graph.