Evidence map›Paper›PMID 35927959›Full record

ArticleBiophysical journal2022

Nucleation causes an actin network to fragment into multiple high-density domains.

Aravind Chandrasekaran, Edward Giniger, Garegin A Papoian

Open access · greenAbstract read
In one paragraph

Article in Biophysical journal, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 6 papers.

0numbers the graph read from it
0cells of the map it votes in
6citing papers in PubMed
0.6field-weighted citation impact, top 39% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

6 citing papers in PubMed, 6 citations in OpenAlex.

  1. Article
  2. Liquid-like condensates mediate competition between actin branching and bundling.Proceedings of the National Academy of Sciences of the United States of America · 2024
    Article
  3. Article
  4. Article
  5. Article
  6. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

3 authors at 2 institutions in 1 country.

Aravind ChandrasekaranDepartment of Chemistry and Biochemistry, University of Maryland, College Park, Maryland; National Institutes of Neurological Diseases and Stroke, National Institutes of Health, Bethesda, Maryland.
Edward GinigerNational Institutes of Neurological Diseases and Stroke, National Institutes of Health, Bethesda, Maryland.
Garegin A PapoianDepartment of Chemistry and Biochemistry, University of Maryland, College Park, Maryland; Institute for Physical Science and Technology, University of Maryland, College Park, Maryland. Electronic address: gpapoian@umd.edu.
National Institutes of Health · USUniversity of Maryland, College Park · US

Funding

Mechanisms of axon guidance during developmentZ01NS003013 · NINDS · NEUROLOGICAL DISORDERS AND STROKE · PI GINIGER, EDWARD · 2005 to 2008
$2.0M
Intramural NIH HHS Z01 NS003013
6 · The paper itself

Abstract

Actin networks rely on nucleation mechanisms to generate new filaments because spontaneous nucleation is kinetically disfavored. Branching nucleation of actin filaments by actin-related protein (Arp2/3), in particular, is critical for actin self-organization. In this study, we use the simulation platform for active matter MEDYAN to generate 2000 s long stochastic trajectories of actin networks, under varying Arp2/3 concentrations, in reaction volumes of biologically meaningful size (>20 μm

Indexed as

Actin CytoskeletonActinsActin-Related Protein 2-3 ComplexCytoskeletonDiffusionActin-Related Protein 2-3 ComplexActins

Identifiers

PMID35927959
PMCPMC9463697
OpenAlexW4289596953

What Socratic holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the Socratic graph.