Evidence map›Paper›PMID 35935949›Full record

ArticleFrontiers in immunology2022

Analyzing the pathogenesis of systemic lupus erythematosus complicated by atherosclerosis using transcriptome data.

Yimin Wang, Wenge Su, Yunlun Li, Jie Yuan, Minghao Yao, Xiaoyi Su, Yifei Wang

Open access · goldAbstract read
In one paragraph

Article in Frontiers in immunology, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 7 papers.

0numbers the graph read from it
0cells of the map it votes in
7citing papers in PubMed
1.5field-weighted citation impact, top 17% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

7 citing papers in PubMed, 9 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors at 1 institution in 1 country.

Yimin WangThe First Clinical Medical College, Shandong University of Traditional Chinese Medicine, Jinan, China.
Wenge SuThe First Clinical Medical College, Shandong University of Traditional Chinese Medicine, Jinan, China.
Yunlun LiThe First Clinical Medical College, Shandong University of Traditional Chinese Medicine, Jinan, China.
Jie YuanThe First Clinical Medical College, Shandong University of Traditional Chinese Medicine, Jinan, China.
Minghao YaoThe First Clinical Medical College, Shandong University of Traditional Chinese Medicine, Jinan, China.
Xiaoyi SuThe First Clinical Medical College, Shandong University of Traditional Chinese Medicine, Jinan, China.
Yifei WangThe First Clinical Medical College, Shandong University of Traditional Chinese Medicine, Jinan, China.
Shandong University of Traditional Chinese Medicine · CN

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Background: Accumulating evidence supports the predisposition of systemic lupus erythematosus (SLE) to atherosclerosis (AS). However, the common pathogenesis of these two diseases remains unclear. This study aimed to explore the mechanisms of SLE complicated by AS. Methods: Gene expression profiles of SLE (GSE50772) and AS (GSE100927) were downloaded from the Gene Expression Omnibus. We analyzed differentially expressed genes (DEGs) of SLE and AS and performed enrichment analyses separately. After analyzing the common DEGs (CDEGs), we performed functional enrichment analysis, protein-protein interaction (PPI) network analysis, and hub genes (HGs) identification of CDEGs. Then, we performed a co-expression analysis of HGs and verified their expression and diagnostic value. We further explored immune cell infiltration and analyzed the correlation between HGs and infiltrating immune cells (IICs). Finally, we verified the reliability of the screening pathway. Results: We obtained 530 DEGs from the GSE50772 dataset and 448 DEGs from the GSE100927 dataset. The results of the enrichment analysis showed that there were many similar immune- and inflammation-related processes between the two diseases. We analyzed 26 CDEGs (two downregulated genes and 24 upregulated genes) and enrichment analysis highlighted the important role of the IL-17 signaling pathway. We identified five HGs ( Conclusions: The five HGs may promote the differentiation of monocytes into macrophages by influencing the IL-17 signaling pathway, leading to SLE complicated by AS. Our study provides insights into the mechanisms of SLE complicated by AS.

Indexed as

AtherosclerosisLupus Erythematosus, SystemicHumansInterleukin-17Matrix Metalloproteinase 9Reproducibility of ResultsTranscriptomeInterleukin-17Matrix Metalloproteinase 9atherosclerosisbioinformaticsdifferentially expressed geneshub genesimmune cell infiltrationsystemic lupus erythematosus

Identifiers

PMID35935949
PMCPMC9354579
OpenAlexW4286742186

What Socratic holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the Socratic graph.