Evidence map›Paper›PMID 35955752›Full record

ArticleInternational journal of molecular sciences2022

Screening and Verification of Photosynthesis and Chloroplast-Related Genes in Mulberry by Comparative RNA-Seq and Virus-Induced Gene Silencing.

Yong Li, Cui Yu, Rongli Mo, Zhixian Zhu, Zhaoxia Dong, Xingming Hu, Wen Deng, Chuxiong Zhuang

Open access · goldAbstract read
In one paragraph

Article in International journal of molecular sciences, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 6 papers.

0numbers the graph read from it
0cells of the map it votes in
6citing papers in PubMed
1.5field-weighted citation impact, top 16% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

6 citing papers in PubMed, 9 citations in OpenAlex.

  1. Article
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  6. Multi-Omics Analysis ofPlants (Basel, Switzerland) · 2023
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors at 2 institutions in 1 country.

Yong LiCollege of Life Sciences, South China Agricultural University, Guangzhou 510642, China.
Cui YuCash Crops Research Institute, Hubei Academy of Agricultural Sciences, Wuhan 430064, China.
Rongli MoCash Crops Research Institute, Hubei Academy of Agricultural Sciences, Wuhan 430064, China.
Zhixian ZhuCash Crops Research Institute, Hubei Academy of Agricultural Sciences, Wuhan 430064, China.
Zhaoxia DongCash Crops Research Institute, Hubei Academy of Agricultural Sciences, Wuhan 430064, China.
Xingming HuCash Crops Research Institute, Hubei Academy of Agricultural Sciences, Wuhan 430064, China.
Wen DengCash Crops Research Institute, Hubei Academy of Agricultural Sciences, Wuhan 430064, China.
Chuxiong ZhuangCollege of Life Sciences, South China Agricultural University, Guangzhou 510642, China.ORCID 0000-0001-7801-3432
Hubei Academy of Agricultural Sciences · CNSouth China Agricultural University · CN

Funding

National Fund for Modern Agricultural Industry Technology System Construction CARS-18-ZJ0208
6 · The paper itself

Abstract

Photosynthesis is one of the most important factors in mulberry growth and production. To study the photosynthetic regulatory network of mulberry we sequenced the transcriptomes of two high-yielding (E1 and E2) and one low-yielding (H32) mulberry genotypes at two-time points (10:00 and 12:00). Re-annotation of the mulberry genome based on the transcriptome sequencing data identified 22,664 high-quality protein-coding genes with a BUSCO-assessed completeness of 93.4%. A total of 6587 differentially expressed genes (DEGs) were obtained in the transcriptome analysis. Functional annotation and enrichment revealed 142 out of 6587 genes involved in the photosynthetic pathway and chloroplast development. Moreover, 3 out of 142 genes were further examined using the VIGS technique; the leaves of

Indexed as

MorusChloroplastsGene Expression ProfilingGene Expression Regulation, PlantGene SilencingPhotosynthesisPlant LeavesPlant ProteinsRNA-SeqTranscriptomePlant Proteinsmulberryphotosynthesis regulationre-annotationtranscriptomesVIGS

Identifiers

PMID35955752
PMCPMC9368790
OpenAlexW4289711712

What Socratic holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the Socratic graph.