Evidence map›Paper›PMID 35982179›Full record

ArticleNature cancer2022

Single-cell analysis and functional characterization uncover the stem cell hierarchies and developmental origins of rhabdomyosarcoma.

Yun Wei, Qian Qin, Chuan Yan, Madeline N Hayes, Sara P Garcia, Haibin Xi, Daniel Do, Alexander H Jin, Tiffany C Eng, Karin M McCarthy and 11 more

Open access · greenAbstract read
In one paragraph

Article in Nature cancer, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 54 papers.

0numbers the graph read from it
0cells of the map it votes in
54citing papers in PubMed
9.1field-weighted citation impact, top 1% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

54 citing papers in PubMed, 62 citations in OpenAlex.

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  16. PLA2 driven lipid signaling drives ARMS tumorigenic cell properties.Cell communication and signaling : CCS · 2025
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

21 authors at 5 institutions in 1 country.

Yun Wei *Molecular Pathology Unit, Massachusetts General Research Institute, Charlestown, MA, USA.
Qian Qin *Molecular Pathology Unit, Massachusetts General Research Institute, Charlestown, MA, USA.
Chuan YanMolecular Pathology Unit, Massachusetts General Research Institute, Charlestown, MA, USA.ORCID http://orcid.org/0000-0002-0449-7072
Madeline N HayesMolecular Pathology Unit, Massachusetts General Research Institute, Charlestown, MA, USA.
Sara P GarciaMolecular Pathology Unit, Massachusetts General Research Institute, Charlestown, MA, USA.
Haibin XiDepartment of Microbiology, Immunology, and Molecular Genetics, University of California Los Angeles, Los Angeles, CA, USA.
Daniel DoMolecular Pathology Unit, Massachusetts General Research Institute, Charlestown, MA, USA.
Alexander H JinMolecular Pathology Unit, Massachusetts General Research Institute, Charlestown, MA, USA.ORCID http://orcid.org/0000-0002-7431-1456
Tiffany C EngMolecular Pathology Unit, Massachusetts General Research Institute, Charlestown, MA, USA.
Karin M McCarthyMolecular Pathology Unit, Massachusetts General Research Institute, Charlestown, MA, USA.
Abhinav AdhikariMolecular Pathology Unit, Massachusetts General Research Institute, Charlestown, MA, USA.
Maristela L OnozatoMolecular Pathology Unit, Massachusetts General Research Institute, Charlestown, MA, USA.
Dimitrios SpentzosCenter for Sarcoma and Connective Tissue Oncology, Department of Orthopedic Surgery, Massachusetts General Hospital, Boston, MA, USA.ORCID http://orcid.org/0000-0001-8455-4809
Gunnlaugur P NeilsenCenter for Sarcoma and Connective Tissue Oncology, Department of Orthopedic Surgery, Massachusetts General Hospital, Boston, MA, USA.
A John IafrateMolecular Pathology Unit, Massachusetts General Research Institute, Charlestown, MA, USA.
Leonard H WexlerDepartment of Pediatrics, Memorial Sloan Kettering Cancer Center, New York, NY, USA.
April D PyleDepartment of Microbiology, Immunology, and Molecular Genetics, University of California Los Angeles, Los Angeles, CA, USA.ORCID http://orcid.org/0000-0001-6122-1649
Mario L SuvàMolecular Pathology Unit, Massachusetts General Research Institute, Charlestown, MA, USA.ORCID http://orcid.org/0000-0001-9898-5351
Filemon Dela CruzDepartment of Pediatrics, Memorial Sloan Kettering Cancer Center, New York, NY, USA.
Luca PinelloMolecular Pathology Unit, Massachusetts General Research Institute, Charlestown, MA, USA. lpinello@mgh.harvard.edu.ORCID http://orcid.org/0000-0003-1109-3823
David M LangenauMolecular Pathology Unit, Massachusetts General Research Institute, Charlestown, MA, USA. dlangenau@mgh.harvard.edu.ORCID http://orcid.org/0000-0001-6664-8318
Harvard University · USMassachusetts General Hospital · USMemorial Sloan Kettering Cancer Center · USUniversity of California, Los Angeles · USBroad Institute · US

Funding

X-RAY CRYSTALLOGRAPHYP30CA008748 · NCI · SLOAN-KETTERING INSTITUTE FOR CANCER RES · PI SELWYN M VICKERS · 1985 to 2026
$347.4M
Screening for Cys-Reactive Ligands to Target PAX3-FOXO1U54CA231630 · NCI · DUKE UNIVERSITY · PI LINARDIC, CORINNE MARY · 2019 to 2023
$6.5M
Reprogramming and Directed Differentiation of Skeletal Muscle Cells from hPSCs.R01AR064327 · NIAMS · UNIVERSITY OF CALIFORNIA LOS ANGELES · PI April D Pyle · 2013 to 2026
$6.4M
Genetics of RhabdomyosarcomaR01CA154923 · NCI · MASSACHUSETTS GENERAL HOSPITAL · PI LANGENAU, DAVID MICHAEL · 2011 to 2021
$3.8M
Multiscale exploration of the functional non-coding genomeR35HG010717 · NHGRI · MASSACHUSETTS GENERAL HOSPITAL · PI PINELLO, LUCA · 2019 to 2023
$2.6M
Oncogenic pathways and therapeutic targets in T cell acute lymphoblastic leukemiaR01CA211734 · NCI · MASSACHUSETTS GENERAL HOSPITAL · PI LANGENAU, DAVID MICHAEL · 2017 to 2021
$1.9M
Stem cell self-renewal programs in rhabdomyosarcomaR01CA215118 · NCI · MASSACHUSETTS GENERAL HOSPITAL · PI LANGENAU, DAVID MICHAEL · 2018 to 2022
$1.9M
Discovering disease-causal variants by linking genetic and epigenetic variationR00HG008399 · NHGRI · MASSACHUSETTS GENERAL HOSPITAL · PI PINELLO, LUCA · 2017 to 2019
$747k
Influx Flow CytometerS10OD016372 · OD · MASSACHUSETTS GENERAL HOSPITAL · PI PREFFER, FREDERIC IRA · 2013 to 2013
$600k
ImageStream X Analyzer 2011S10OD012027 · OD · MASSACHUSETTS GENERAL HOSPITAL · PI PREFFER, FREDERIC IRA · 2012 to 2012
$595k
Translational Immunology Core's FACSAria Cell SorterS10RR023440 · NCRR · MASSACHUSETTS GENERAL HOSPITAL · PI PREFFER, FREDERIC IRA · 2008 to 2008
$500k
DEPARTMENT OF PATHOLOGY LSR2 CYTOMETER: TRANSPLANTATIONS10RR020936 · NCRR · MASSACHUSETTS GENERAL HOSPITAL · PI PREFFER, FREDERIC IRA · 2005 to 2005
$389k
NCI NIH HHS K99 CA278696NCI NIH HHS P30 CA008748NCI NIH HHS R01 CA154923NCI NIH HHS R01 CA211734NCI NIH HHS R01 CA215118NCI NIH HHS U54 CA231630NCRR NIH HHS S10 RR020936NCRR NIH HHS S10 RR023440NHGRI NIH HHS R00 HG008399NHGRI NIH HHS R35 HG010717NIAMS NIH HHS R01 AR064327NIH HHS S10 OD012027NIH HHS S10 OD016372
6 · The paper itself

Abstract

Rhabdomyosarcoma (RMS) is a common childhood cancer that shares features with developing skeletal muscle. Yet, the conservation of cellular hierarchy with human muscle development and the identification of molecularly defined tumor-propagating cells has not been reported. Using single-cell RNA-sequencing, DNA-barcode cell fate mapping and functional stem cell assays, we uncovered shared tumor cell hierarchies in RMS and human muscle development. We also identified common developmental stages at which tumor cells become arrested. Fusion-negative RMS cells resemble early myogenic cells found in embryonic and fetal development, while fusion-positive RMS cells express a highly specific gene program found in muscle cells transiting from embryonic to fetal development at 7-7.75 weeks of age. Fusion-positive RMS cells also have neural pathway-enriched states, suggesting less-rigid adherence to muscle-lineage hierarchies. Finally, we identified a molecularly defined tumor-propagating subpopulation in fusion-negative RMS that shares remarkable similarity to bi-potent, muscle mesenchyme progenitors that can make both muscle and osteogenic cells.

Indexed as

RhabdomyosarcomaRhabdomyosarcoma, EmbryonalChildHumansMuscle, SkeletalSingle-Cell AnalysisStem Cells

Identifiers

PMID35982179
PMCPMC10430812
OpenAlexW4292223704

What Socratic holds

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the Socratic graph.