Evidence map›Paper›PMID 36031581›Full record

ArticleChemMedChem2022

Toward a Home Test for COVID-19 Diagnosis: DNA Machine for Amplification-Free SARS-CoV-2 Detection in Clinical Samples.

Ahmed A El-Deeb, Sofia S Zablotskaya, Maria S Rubel, Moustapha A Y Nour, Liubov I Kozlovskaya, Anna A Shtro, Andrey B Komissarov, Dmitry M Kolpashchikov

Abstract read
In one paragraph

Article in ChemMedChem, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 5 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
5citing papers in PubMed, 1 pooled it
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

5 citing papers in PubMed, 1 synthesis or guideline pooled it.

  1. Pooled it
  2. Differentiation ofBio-protocol · 2025
    Article
  3. DNA Nanomachine (DNM) Biplex Assay for DifferentiatingInternational journal of molecular sciences · 2023
    Article
  4. Article
  5. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors.

Ahmed A El-DeebLaboratory of Molecular Robotics and Biosensor Materials, SCAMT Institute, ITMO University, 191002, Saint Petersburg, Russia.
Sofia S ZablotskayaLaboratory of Molecular Robotics and Biosensor Materials, SCAMT Institute, ITMO University, 191002, Saint Petersburg, Russia.
Maria S RubelLaboratory of Molecular Robotics and Biosensor Materials, SCAMT Institute, ITMO University, 191002, Saint Petersburg, Russia.
Moustapha A Y NourLaboratory of Molecular Robotics and Biosensor Materials, SCAMT Institute, ITMO University, 191002, Saint Petersburg, Russia.
Liubov I KozlovskayaChumakov Federal Scientific Center for Research and Development of Immune-and-Biological Products, Russian Academy of Sciences, Institute of Poliomyelitis, Moscow, Russia.
Anna A ShtroSmorodintsev Research Institute of Influenza, 197376, Saint Petersburg, Russia.
Andrey B KomissarovSmorodintsev Research Institute of Influenza, 197376, Saint Petersburg, Russia.
Dmitry M KolpashchikovLaboratory of Molecular Robotics and Biosensor Materials, SCAMT Institute, ITMO University, 191002, Saint Petersburg, Russia.ORCID 0000-0002-8682-6553

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Nucleic acid-based detection of RNA viruses requires an annealing procedure to obtain RNA/probe or RNA/primer complexes for unwinding stable structures of folded viral RNA. In this study, we designed a protein-enzyme-free nano-construction, named four-armed DNA machine (4DNM), that requires neither an amplification stage nor a high-temperature annealing step for SARS-CoV-2 detection. It uses a binary deoxyribozyme (BiDz) sensor incorporated in a DNA nanostructure equipped with a total of four RNA-binding arms. Additional arms were found to improve the limit of detection at least 10-fold. The sensor distinguished SARS-CoV-2 from other respiratory viruses and correctly identified five positive and six negative clinical samples verified by quantitative polymerase chain reaction (RT-qPCR). The strategy reported here can be used for the detection of long natural RNA and can become a basis for a point-of-care or home diagnostic test.

Indexed as

COVID-19DNA, CatalyticHumansReal-Time Polymerase Chain ReactionRNA, ViralSARS-CoV-2DNA, CatalyticRNA, Viral10-23 DNAzymebinary hybridization probedeoxyribozyme sensordetection of folded RNADNA machine

Identifiers

PMID36031581
PMCPMC9538286

What Socratic holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the Socratic graph.