Evidence map›Paper›PMID 36038143›Full record

ArticleACS chemical biology2022

Unraveling the Photoactivation Mechanism of a Light-Activated Adenylyl Cyclase Using Ultrafast Spectroscopy Coupled with Unnatural Amino Acid Mutagenesis.

Jinnette Tolentino Collado, James N Iuliano, Katalin Pirisi, Samruddhi Jewlikar, Katrin Adamczyk, Gregory M Greetham, Michael Towrie, Jeremy R H Tame, Stephen R Meech, Peter J Tonge and 1 more

Open access · hybridAbstract read
In one paragraph

Article in ACS chemical biology, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 14 papers.

0numbers the graph read from it
0cells of the map it votes in
14citing papers in PubMed
2.5field-weighted citation impact, top 10% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

14 citing papers in PubMed, 25 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

11 authors at 5 institutions in 4 countries.

Jinnette Tolentino ColladoDepartment of Chemistry, Stony Brook University, New York, New York 11794, United States.
James N IulianoDepartment of Chemistry, Stony Brook University, New York, New York 11794, United States.ORCID 0000-0003-1213-3292
Katalin PirisiDepartment of Biophysics, Medical School, University of Pecs, Szigeti Street 12, Pecs 7624, Hungary.
Samruddhi JewlikarDepartment of Chemistry, Stony Brook University, New York, New York 11794, United States.
Katrin AdamczykSchool of Chemistry, University of East Anglia, Norwich NR4 7TJ, U.K.
Gregory M GreethamCentral Laser Facility, Research Complex at Harwell, Rutherford Appleton Laboratory, Didcot OX11 0QX, U.K.
Michael TowrieCentral Laser Facility, Research Complex at Harwell, Rutherford Appleton Laboratory, Didcot OX11 0QX, U.K.
Jeremy R H TameDrug Design Laboratory, Graduate School of Medical Life Science, Yokohama City University, Tsurumi, Yokohama 230-0045, Japan.ORCID 0000-0002-9341-7280
Stephen R MeechSchool of Chemistry, University of East Anglia, Norwich NR4 7TJ, U.K.ORCID 0000-0001-5561-2782
Peter J TongeDepartment of Chemistry, Stony Brook University, New York, New York 11794, United States.ORCID 0000-0003-1606-3471
Andras LukacsDepartment of Biophysics, Medical School, University of Pecs, Szigeti Street 12, Pecs 7624, Hungary.ORCID 0000-0001-8841-9823
Stony Brook University · USRutherford Appleton Laboratory · GBUniversity of East Anglia · GBUniversity of Pecs · HUYokohama City University · JP

Funding

IRACDA - The New York Consortium for the Advancement of Postdoctoral Scholars (NY CAPS)Phase IIK12GM102778 · NIGMS · STATE UNIVERSITY NEW YORK STONY BROOK · PI Carol A. Carter, Karian Janice Wright · 2012 to 2026
$13.1M
IMSD at Stony Brook University: Maximizing Excellence in Research for Graduate Education -- Fostering Inclusive Research Scientist Training (FIRST)T32GM135746 · NIGMS · STATE UNIVERSITY NEW YORK STONY BROOK · PI GERGEN, JOHN PETER · 2021 to 2025
$2.3M
SBU Chemistry-Biology Interface Training ProgramT32GM092714 · NIGMS · STATE UNIVERSITY NEW YORK STONY BROOK · PI SAMPSON, NICOLE S, TONGE, PETER J · 2010 to 2019
$1.7M
NIGMS NIH HHS K12 GM102778NIGMS NIH HHS T32 GM092714NIGMS NIH HHS T32 GM135746
6 · The paper itself

Abstract

The hydrogen bonding network that surrounds the flavin in blue light using flavin adenine dinucleotide (BLUF) photoreceptors plays a crucial role in sensing and communicating the changes in the electronic structure of the flavin to the protein matrix upon light absorption. Using time-resolved infrared spectroscopy (TRIR) and unnatural amino acid incorporation, we investigated the photoactivation mechanism and the role of the conserved tyrosine (Y6) in the forward reaction of the photoactivated adenylyl cyclase from

Indexed as

Adenylyl CyclasesFlavin-Adenine DinucleotideAdenosine TriphosphateAmino AcidsBacterial ProteinsFlavinsLightMutagenesisProtonsSpectrum AnalysisTyrosineAdenosine TriphosphateAdenylyl CyclasesAmino AcidsBacterial ProteinsFlavin-Adenine DinucleotideFlavinsProtonsTyrosine

Identifiers

PMID36038143
PMCPMC9486806
OpenAlexW4293681077

What Socratic holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the Socratic graph.