Evidence map›Paper›PMID 36039298›Full record

ArticleiScience2022

Sex-specific transcriptomic and epitranscriptomic signatures of PTSD-like fear acquisition.

Andre L M Reis, Jillian M Hammond, Igor Stevanovski, Jonathon C Arnold, Iain S McGregor, Ira W Deveson, Anand Gururajan

Open access · goldAbstract read
In one paragraph

Article in iScience, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 13 papers.

0numbers the graph read from it
0cells of the map it votes in
13citing papers in PubMed
1.0field-weighted citation impact, top 25% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

13 citing papers in PubMed, 12 citations in OpenAlex.

  1. Review
  2. Article
  3. Article
  4. Article
  5. Article
  6. Article
  7. Article
  8. Article
  9. Sex-based differences in short- and longer-term diet-induced metabolic heart disease.American journal of physiology. Heart and circulatory physiology · 2024
    Article
  10. Review
  11. Article
  12. Review
  13. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors at 4 institutions in 1 country.

Andre L M ReisGenomics Pillar, Garvan Institute of Medical Research, Sydney, NSW 2010, Australia.
Jillian M HammondGenomics Pillar, Garvan Institute of Medical Research, Sydney, NSW 2010, Australia.
Igor StevanovskiGenomics Pillar, Garvan Institute of Medical Research, Sydney, NSW 2010, Australia.
Jonathon C ArnoldFaculty of Medicine and Health, Sydney Pharmacy School, Discipline of Pharmacology, The University of Sydney, Sydney, NSW 2050, Australia.
Iain S McGregorBrain & Mind Centre, The University of Sydney, Sydney, NSW 2050, Australia.
Ira W DevesonGenomics Pillar, Garvan Institute of Medical Research, Sydney, NSW 2010, Australia.
Anand GururajanBrain & Mind Centre, The University of Sydney, Sydney, NSW 2050, Australia.
University of Sydney · AUMurdoch Children's Research Institute · AUGarvan Institute of Medical Research · AUUNSW Sydney · AU

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Our understanding of the molecular pathology of posttraumatic stress disorder (PTSD) is evolving due to advances in sequencing technologies. With the recent emergence of Oxford Nanopore direct RNA-seq (dRNA-seq), it is now also possible to interrogate diverse RNA modifications, collectively known as the "epitranscriptome.". Here, we present our analyses of the male and female mouse amygdala transcriptome and epitranscriptome, obtained using parallel Illumina RNA-seq and Oxford Nanopore dRNA-seq, associated with the acquisition of PTSD-like fear induced by Pavlovian cued-fear conditioning. We report significant sex-specific differences in the amygdala transcriptional response during fear acquisition and a range of shared and dimorphic epitranscriptomic signatures. Differential RNA modifications are enriched among mRNA transcripts associated with neurotransmitter regulation and mitochondrial function, many of which have been previously implicated in PTSD. Very few differentially modified transcripts are also differentially expressed, suggesting an influential, expression-independent role for epitranscriptional regulation in PTSD-like fear acquisition.

Indexed as

Behavioral neuroscienceMolecular biologyMolecular mechanism of behaviorOmicsTranscriptomics

Identifiers

PMID36039298
PMCPMC9418440
OpenAlexW4289527025

What Socratic holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the Socratic graph.