Evidence map›Paper›PMID 36044776›Full record

ArticleBiochemistry2022

Structural Insights into Binding of Remdesivir Triphosphate within the Replication-Transcription Complex of SARS-CoV-2.

Jimin Wang, Yuanjun Shi, Krystle Reiss, Federica Maschietto, Elias Lolis, William H Konigsberg, George P Lisi, Victor S Batista

Open access · greenAbstract read
In one paragraph

Article in Biochemistry, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 11 papers.

0numbers the graph read from it
0cells of the map it votes in
11citing papers in PubMed
1.4field-weighted citation impact, top 17% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

11 citing papers in PubMed, 15 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors at 2 institutions in 1 country.

Jimin WangDepartment of Molecular Biophysics and Biochemistry, Yale University, New Haven, Connecticut 06520-8114, United States.ORCID 0000-0002-4504-8038
Yuanjun ShiDepartment of Chemistry, Yale University, New Haven, Connecticut 06520-8499, United States.
Krystle ReissDepartment of Chemistry, Yale University, New Haven, Connecticut 06520-8499, United States.
Federica MaschiettoDepartment of Chemistry, Yale University, New Haven, Connecticut 06520-8499, United States.ORCID 0000-0002-5995-2765
Elias LolisDepartment of Pharmacology, Yale University, New Haven, Connecticut 06520-8066, United States.ORCID 0000-0002-7902-7868
William H KonigsbergDepartment of Molecular Biophysics and Biochemistry, Yale University, New Haven, Connecticut 06520-8114, United States.
George P LisiDepartment of Molecular and Cell Biology and Biochemistry, Brown University, Providence, Rhode Island 02912, United States.ORCID 0000-0001-8878-5655
Victor S BatistaDepartment of Chemistry, Yale University, New Haven, Connecticut 06520-8499, United States.ORCID 0000-0002-3262-1237
Yale University · USBrown University · US

Funding

Computational and Biochemical Studies of Temperature Effects on Allostery in the Imidazole Glycerol Phosphate Synthase (IGPS) from T. maritimaR01GM106121 · NIGMS · YALE UNIVERSITY · PI BATISTA, VICTOR S, LORIA, JOSEPH P · 2014 to 2021
$2.3M
NIGMS NIH HHS R01 GM106121
6 · The paper itself

Abstract

Remdesivir is an adenosine analogue that has a cyano substitution in the C1' position of the ribosyl moiety and a modified base structure to stabilize the linkage of the base to the C1' atom with its strong electron-withdrawing cyano group. Within the replication-transcription complex (RTC) of SARS-CoV-2, the RNA-dependent RNA polymerase nsp12 selects remdesivir monophosphate (RMP) over adenosine monophosphate (AMP) for nucleotide incorporation but noticeably slows primer extension after the added RMP of the RNA duplex product is translocated by three base pairs. Cryo-EM structures have been determined for the RTC with RMP at the nucleotide-insertion (

Indexed as

Adenosine TriphosphateAntiviral AgentsSARS-CoV-2Adenosine MonophosphateAlanineCoronavirus RNA-Dependent RNA PolymeraseCOVID-19 Drug TreatmentDeoxyribonucleotidesHydrogenNucleotidesRibonucleotidesRNA, ViralAdenosine MonophosphateAdenosine TriphosphateAlanineAntiviral AgentsCoronavirus RNA-Dependent RNA PolymeraseDeoxyribonucleotidesGS-441524 monophosphateGS-441524 triphosphateHydrogenNucleotidesRibonucleotidesRNA, Viral

Identifiers

PMID36044776
PMCPMC9469760
OpenAlexW4293843109

What Socratic holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the Socratic graph.