Evidence map›Paper›PMID 36048273›Full record

ArticleJournal of cancer research and clinical oncology2023

Gene signature of m6A-related targets to predict prognosis and immunotherapy response in ovarian cancer.

Wei Tan, Shiyi Liu, Zhimin Deng, Fangfang Dai, Mengqin Yuan, Wei Hu, Bingshu Li, Yanxiang Cheng

Open access · greenAbstract read
In one paragraph

Article in Journal of cancer research and clinical oncology, 2023. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 14 papers.

0numbers the graph read from it
0cells of the map it votes in
14citing papers in PubMed
2.1field-weighted citation impact, top 12% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

14 citing papers in PubMed, 21 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors at 1 institution in 1 country.

Wei Tan *Department of Obstetrics and Gynecology, Renmin Hospital of Wuhan University, Wuhan, 430060, China.ORCID http://orcid.org/0000-0001-8114-8290
Shiyi Liu *Department of Obstetrics and Gynecology, Renmin Hospital of Wuhan University, Wuhan, 430060, China.
Zhimin DengDepartment of Obstetrics and Gynecology, Renmin Hospital of Wuhan University, Wuhan, 430060, China.
Fangfang DaiDepartment of Obstetrics and Gynecology, Renmin Hospital of Wuhan University, Wuhan, 430060, China.
Mengqin YuanDepartment of Obstetrics and Gynecology, Renmin Hospital of Wuhan University, Wuhan, 430060, China.
Wei HuDepartment of Obstetrics and Gynecology Ultrasound, Renmin Hospital of Wuhan University, Wuhan, 430060, China.
Bingshu LiDepartment of Obstetrics and Gynecology, Renmin Hospital of Wuhan University, Wuhan, 430060, China. 416728484@qq.com.
Yanxiang ChengDepartment of Obstetrics and Gynecology, Renmin Hospital of Wuhan University, Wuhan, 430060, China. yanxiangCheng@whu.edu.cn.
Wuhan University · CN

Funding

China Medical Association Clinical Medical Research Special Fund Project 17020310700Educational and Teaching Reform Research Project 413200095Graduate credit course projects 413000206Key Research and Development Program of Hubei Province 2020BCB023the Fundamental Research Funds for the Central Universities 2042020kf1013the National Natural Science Foundation of China 81860276the National Natural Science Foundation of China 82071655
6 · The paper itself

Abstract

purposeThe aim of the study was to construct a risk score model based on m6A-related targets to predict overall survival and immunotherapy response in ovarian cancer.

methodsThe gene expression profiles of 24 m6A regulators were extracted. Survival analysis screened 9 prognostic m6A regulators. Next, consensus clustering analysis was applied to identify clusters of ovarian cancer patients. Furthermore, 47 phenotype-related differentially expressed genes, strongly correlated with 9 prognostic m6A regulators, were screened and subjected to univariate and the least absolute shrinkage and selection operator (LASSO) Cox regression. Ultimately, a nomogram was constructed which presented a strong ability to predict overall survival in ovarian cancer.

resultsCBLL1, FTO, HNRNPC, METTL3, METTL14, WTAP, ZC3H13, RBM15B and YTHDC2 were associated with worse overall survival (OS) in ovarian cancer. Three m6A clusters were identified, which were highly consistent with the three immune phenotypes. What is more, a risk model based on seven m6A-related targets was constructed with distinct prognosis. In addition, the low-risk group is the best candidate population for immunotherapy.

conclusionWe comprehensively analyzed the m6A modification landscape of ovarian cancer and detected seven m6A-related targets as an independent prognostic biomarker for predicting survival. Furthermore, we divided patients into high- and low-risk groups with distinct prognosis and select the optimum population which may benefit from immunotherapy and constructed a nomogram to precisely predict ovarian cancer patients' survival time and visualize the prediction results.

Indexed as

NomogramsOvarian NeoplasmsAlpha-Ketoglutarate-Dependent Dioxygenase FTOCluster AnalysisFemaleHumansImmunotherapyMethyltransferasesPrognosisUbiquitin-Protein LigasesAlpha-Ketoglutarate-Dependent Dioxygenase FTOCBLL1 protein, humanFTO protein, humanMethyltransferasesMETTL3 protein, humanUbiquitin-Protein LigasesImmunotherapyOvarian cancerPrognosisRNA N6-methyladenosineTumor mutation burden

Identifiers

PMID36048273
PMCPMC11797572
OpenAlexW4294082090

What Socratic holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the Socratic graph.