Evidence map›Paper›PMID 36064777›Full record

ArticleNature communications2022

Distinct ankyrin repeat subdomains control VAPYRIN locations and intracellular accommodation functions during arbuscular mycorrhizal symbiosis.

Penelope L Lindsay, Sergey Ivanov, Nathan Pumplin, Xinchun Zhang, Maria J Harrison

Abstract read
In one paragraph

Article in Nature communications, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 8 papers.

0numbers the graph read from it
0cells of the map it votes in
8citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

8 citing papers in PubMed.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors.

Penelope L LindsayBoyce Thompson Institute, 533 Tower Rd., Ithaca, NY, 14853, USA.ORCID 0000-0002-0958-0529
Sergey IvanovBoyce Thompson Institute, 533 Tower Rd., Ithaca, NY, 14853, USA.
Nathan PumplinBoyce Thompson Institute, 533 Tower Rd., Ithaca, NY, 14853, USA.
Xinchun ZhangBoyce Thompson Institute, 533 Tower Rd., Ithaca, NY, 14853, USA.
Maria J HarrisonBoyce Thompson Institute, 533 Tower Rd., Ithaca, NY, 14853, USA. mjh78@cornell.edu.ORCID 0000-0001-8716-1875

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Over 70% of vascular flowering plants engage in endosymbiotic associations with arbuscular mycorrhizal (AM) fungi. VAPYRIN (VPY) is a plant protein that is required for intracellular accommodation of AM fungi but how it functions is still unclear. VPY has a large ankyrin repeat domain with potential for interactions with multiple proteins. Here we show that overexpression of the ankyrin repeat domain results in a vpy-like phenotype, consistent with the sequestration of interacting proteins. We identify distinct ankyrin repeats that are essential for intracellular accommodation of arbuscules and reveal that VPY functions in both the cytoplasm and nucleus. VPY interacts with two kinases, including DOES NOT MAKE INFECTIONS3 (DMI3), a nuclear-localized symbiosis signaling kinase. Overexpression of VPY in a symbiosis-attenuated genetic background results in a dmi3 -like phenotype suggesting that VPY negatively influences DMI3 function. Overall, the data indicate a requirement for VPY in the nucleus and cytoplasm where it may coordinate signaling and cellular accommodation processes.

Indexed as

Medicago truncatulaMycorrhizaeAnkyrin RepeatPlant ProteinsPlant RootsSymbiosisPlant Proteins

Identifiers

PMID36064777
PMCPMC9445082

What Socratic holds

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LicenceCC BY
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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the Socratic graph.