Evidence map›Paper›PMID 36070755›Full record

ArticleJournal of experimental botany2022

Genome editing of SlMYB3R3, a cell cycle transcription factor gene of tomato, induces elongated fruit shape.

Qingyou Zheng, Rie Takei-Hoshi, Hitomi Okumura, Masaki Ito, Kohei Kawaguchi, Shungo Otagaki, Shogo Matsumoto, Zhengrong Luo, Qinglin Zhang, Katsuhiro Shiratake

Open access · hybridAbstract read
In one paragraph

Article in Journal of experimental botany, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 8 papers.

0numbers the graph read from it
0cells of the map it votes in
8citing papers in PubMed
1.3field-weighted citation impact, top 20% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

8 citing papers in PubMed, 15 citations in OpenAlex.

  1. The transcription factor ZmMYB3R targets CYCB1;2 to modulate maize drought tolerance.The Plant journal : for cell and molecular biology · 2026
    Article
  2. QTL mapping for berry firmness and functional characterization of a prioritized candidate gene VvNAC83 in grape.TAG. Theoretical and applied genetics. Theoretische und angewandte Genetik · 2026
    Article
  3. Article
  4. Review
  5. Molecular breeding of tomato: Advances and challenges.Journal of integrative plant biology · 2025
    Review
  6. Article
  7. Review
  8. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

10 authors at 3 institutions in 2 countries.

Qingyou ZhengGraduate School of Bioagricultural Sciences, Nagoya University, Nagoya 464-8601, Japan.
Rie Takei-HoshiGraduate School of Bioagricultural Sciences, Nagoya University, Nagoya 464-8601, Japan.
Hitomi OkumuraGraduate School of Bioagricultural Sciences, Nagoya University, Nagoya 464-8601, Japan.
Masaki ItoSchool of Biological Science and Technology, College of Science and Engineering, Kanazawa University, Kanazawa 920-1192, Japan.
Kohei KawaguchiGraduate School of Bioagricultural Sciences, Nagoya University, Nagoya 464-8601, Japan.
Shungo OtagakiGraduate School of Bioagricultural Sciences, Nagoya University, Nagoya 464-8601, Japan.
Shogo MatsumotoGraduate School of Bioagricultural Sciences, Nagoya University, Nagoya 464-8601, Japan.
Zhengrong LuoKey Laboratory of Horticultural Plant Biology, Huazhong Agricultural University, Wuhan 430070, China.
Qinglin ZhangKey Laboratory of Horticultural Plant Biology, Huazhong Agricultural University, Wuhan 430070, China.
Katsuhiro ShiratakeGraduate School of Bioagricultural Sciences, Nagoya University, Nagoya 464-8601, Japan.ORCID 0000-0002-2608-7912
Nagoya University · JPHuazhong Agricultural University · CNKanazawa University · JP

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Fruit shape is an important trait that attracts consumers, and the regulation of genes related to cell division is crucial for shaping multicellular organs. In Arabidopsis, MYB3R transcription factors, which harbor three imperfect repeats in the N-terminus, control organ growth by regulating cell division. However, the function of MYB3Rs in tomato remains unknown. Here, we characterized tomato SlMYB3R3, which was preferentially expressed in flowers and placed in a subclade with two Arabidopsis cell cycle suppressors (MYB3R3/5). slmyb3r3 knockout mutants were generated using the CRISPR/Cas9 system. Morphological observation of the slmyb3r3 mutants showed that fruits that were elongated and occasionally peanut-like in shape were formed, which was caused by significantly increased cell numbers in the longitudinal direction. Transcriptome and yeast one-hybrid assay results suggested that SlMYB3R3 acted as a suppressor of cell-cycle-related genes by binding to the mitosis-specific activator (MSA) motifs in their promoters. Taken together, knock out of the suppressor SlMYB3R3 leads to elongated fruit, which results from the altered cell division pattern at the ovary stage, by regulating cell-cycle-related genes in an MSA-dependent manner. Our results suggest that SlMYB3R3 and its orthologs have the potential to change fruit shape as part of the molecular breeding of fruit crops.

Indexed as

ArabidopsisSolanum lycopersicumCell CycleCell DivisionFruitGene EditingTranscription FactorsTranscription FactorsCell cycleCRISPR/Cas9cytokinesisfruit shapeMSA motifMYB3Rtomatotranscription factor

Identifiers

PMID36070755
PMCPMC9730800
OpenAlexW4294991599

What Socratic holds

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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the Socratic graph.