Evidence map›Paper›PMID 36097294›Full record

ArticleNature structural & molecular biology2022

Smc5/6 silences episomal transcription by a three-step function.

Fabien Abdul, Aurélie Diman, Bastien Baechler, Dhivya Ramakrishnan, Dmytro Kornyeyev, Rudolf K Beran, Simon P Fletcher, Michel Strubin

Erratum issuedAbstract read
PubMed Publisher
In one paragraph

Article in Nature structural & molecular biology, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. An erratum has been issued. Cited by 26 papers.

0numbers the graph read from it
0cells of the map it votes in
26citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

26 citing papers in PubMed.

  1. Article
  2. Article
  3. Article
  4. Article
  5. Structural Maintenance of Chromosomes Complexes.Methods in molecular biology (Clifton, N.J.) · 2025
    Review
  6. Review
  7. Article
  8. Review
  9. Review
  10. Article
  11. Article
  12. Review
  13. Review
  14. Review
  15. Review
  16. Article
  17. Article
  18. Article
  19. Article
  20. Genome control by SMC complexes.Nature reviews. Molecular cell biology · 2023
    Review
4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

8 authors.

Fabien AbdulDepartment of Microbiology and Molecular Medicine, University Medical Centre, Geneva, Switzerland.ORCID http://orcid.org/0000-0003-4876-3595
Aurélie DimanDepartment of Microbiology and Molecular Medicine, University Medical Centre, Geneva, Switzerland.ORCID http://orcid.org/0000-0003-2158-4802
Bastien BaechlerDepartment of Microbiology and Molecular Medicine, University Medical Centre, Geneva, Switzerland.
Dhivya RamakrishnanGilead Sciences, Foster City, CA, USA.
Dmytro KornyeyevGilead Sciences, Foster City, CA, USA.
Rudolf K BeranGilead Sciences, Foster City, CA, USA.
Simon P FletcherGilead Sciences, Foster City, CA, USA.
Michel StrubinDepartment of Microbiology and Molecular Medicine, University Medical Centre, Geneva, Switzerland. Michel.Strubin@unige.ch.ORCID http://orcid.org/0000-0002-8092-5534

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

In addition to its role in chromosome maintenance, the six-membered Smc5/6 complex functions as a restriction factor that binds to and transcriptionally silences viral and other episomal DNA. However, the underlying mechanism is unknown. Here, we show that transcriptional silencing by the human Smc5/6 complex is a three-step process. The first step is entrapment of the episomal DNA by a mechanism dependent on Smc5/6 ATPase activity and a function of its Nse4a subunit for which the Nse4b paralog cannot substitute. The second step results in Smc5/6 recruitment to promyelocytic leukemia nuclear bodies by SLF2 (the human ortholog of Nse6). The third step promotes silencing through a mechanism requiring Nse2 but not its SUMO ligase activity. By contrast, the related cohesin and condensin complexes fail to bind to or silence episomal DNA, indicating a property unique to Smc5/6.

Indexed as

SumoylationAdenosine TriphosphatasesCell Cycle ProteinsChromosomal Proteins, Non-HistoneDNADNA RepairHumansLigasesAdenosine TriphosphatasesCell Cycle ProteinsChromosomal Proteins, Non-HistoneDNALigasesSMC5 protein, humanSMC6 protein, human

Identifiers

What Socratic holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the Socratic graph.