Evidence map›Paper›PMID 36098073›Full record

ArticlePhysical chemistry chemical physics : PCCP2022

Mechanistic insight into functionally different human islet polypeptide (hIAPP) amyloid: the intrinsic role of the C-terminal structural motifs.

Dibakar Sarkar, Narayan Chandra Maity, Gourav Shome, Kyriakos Gabriel Varnava, Vijayalekshmi Sarojini, Subramanian Vivekanandan, Nirakar Sahoo, Sourav Kumar, Atin Kumar Mandal, Ranjit Biswas and 1 more

Open access · greenAbstract read
In one paragraph

Article in Physical chemistry chemical physics : PCCP, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Not yet cited in PubMed.

0numbers the graph read from it
0cells of the map it votes in
0citing papers in PubMed
0.5field-weighted citation impact, top 38% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

0 citing papers in PubMed, 7 citations in OpenAlex.

No citing paper in PubMed yet.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

11 authors at 5 institutions in 3 countries.

Dibakar SarkarDepartment of Biophysics, Bose Institute, EN 80, Sector V, Kolkata 700 091, India. bhunia@jcbose.ac.in.
Narayan Chandra MaityChemical, Biological and Macromolecular Sciences, S. N. Bose National Centre for Basic Sciences, Sector-III, Salt Lake, Kolkata 700106, India.
Gourav ShomeDivision of Molecular Medicine, Bose Institute, EN 80, Sector V, Kolkata 700 091, India.ORCID http://orcid.org/0000-0003-1186-5029
Kyriakos Gabriel VarnavaSchool of Chemical Sciences, The University of Auckland, Private Bag 92019, Auckland, New Zealand.
Vijayalekshmi SarojiniSchool of Chemical Sciences, The University of Auckland, Private Bag 92019, Auckland, New Zealand.ORCID http://orcid.org/0000-0002-5593-8851
Subramanian VivekanandanCollege of Pharmacy, University of Kentucky, Lexington, KY 40536-0596, USA.
Nirakar SahooDepartment of Biology, University of Texas Rio Grande Valley, Edinburg, Texas, 78539, USA.
Sourav KumarDepartment of Biophysics, Bose Institute, EN 80, Sector V, Kolkata 700 091, India. bhunia@jcbose.ac.in.
Atin Kumar MandalDivision of Molecular Medicine, Bose Institute, EN 80, Sector V, Kolkata 700 091, India.
Ranjit BiswasChemical, Biological and Macromolecular Sciences, S. N. Bose National Centre for Basic Sciences, Sector-III, Salt Lake, Kolkata 700106, India.ORCID http://orcid.org/0000-0003-4472-5743
Anirban BhuniaDepartment of Biophysics, Bose Institute, EN 80, Sector V, Kolkata 700 091, India. bhunia@jcbose.ac.in.ORCID http://orcid.org/0000-0002-8752-2842
Bose Institute · INS.N. Bose National Centre for Basic Sciences · INUniversity of Auckland · NZThe University of Texas Rio Grande Valley · USUniversity of Kentucky · US

Funding

Emerging role of heme and heme degradation products in the modulation of cardiac ion channelsSC2GM139715 · NIGMS · UNIVERSITY OF TEXAS RIO GRANDE VALLEY · PI SAHOO, NIRAKAR · 2021 to 2023
$444k
NIGMS NIH HHS SC2 GM139715
6 · The paper itself

Abstract

Targeting amyloidosis requires high-resolution insight into the underlying mechanisms of amyloid aggregation. The sequence-specific intrinsic properties of a peptide or protein largely govern the amyloidogenic propensity. Thus, it is essential to delineate the structural motifs that define the subsequent downstream amyloidogenic cascade of events. Additionally, it is important to understand the role played by extrinsic factors, such as temperature or sample agitation, in modulating the overall energy barrier that prompts divergent nucleation events. Consequently, these changes can affect the fibrillation kinetics, resulting in structurally and functionally distinct amyloidogenic conformers associated with disease pathogenesis. Here, we have focused on human Islet Polypeptide (hIAPP) amyloidogenesis for the full-length peptide along with its N- and C-terminal fragments, under different temperatures and sample agitation conditions. This helped us to gain a comprehensive understanding of the intrinsic role of specific functional epitopes in the primary structure of the peptide that regulates amyloidogenesis and subsequent cytotoxicity. Intriguingly, our study involving an array of biophysical experiments and

Indexed as

AmyloidosisIslet Amyloid PolypeptideAmyloidAmyloidogenic ProteinsEpitopesHumansAmyloidAmyloidogenic ProteinsEpitopesIslet Amyloid Polypeptide

Identifiers

PMID36098073
PMCPMC9618256
OpenAlexW4294584093

What Socratic holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the Socratic graph.