Evidence map›Paper›PMID 36114277›Full record

ArticleMolecular psychiatry2022

Leveraging interindividual variability of regulatory activity for refining genetic regulation of gene expression in schizophrenia.

Maris Alver, Nikolaos Lykoskoufis, Anna Ramisch, Emmanouil T Dermitzakis, Halit Ongen

Open access · hybridAbstract read
In one paragraph

Article in Molecular psychiatry, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 4 papers.

0numbers the graph read from it
0cells of the map it votes in
4citing papers in PubMed
1.1field-weighted citation impact, top 20% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

4 citing papers in PubMed, 8 citations in OpenAlex.

  1. Article
  2. Article
  3. Article
  4. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors at 1 institution in 2 countries.

Maris AlverDepartment of Genetic Medicine and Development, University of Geneva, Geneva, Switzerland. maris.alver@unige.ch.ORCID http://orcid.org/0000-0001-6540-1460
Nikolaos LykoskoufisDepartment of Genetic Medicine and Development, University of Geneva, Geneva, Switzerland.
Anna RamischDepartment of Genetic Medicine and Development, University of Geneva, Geneva, Switzerland.
Emmanouil T DermitzakisDepartment of Genetic Medicine and Development, University of Geneva, Geneva, Switzerland.
Halit OngenDepartment of Genetic Medicine and Development, University of Geneva, Geneva, Switzerland. halit.ongen@unige.ch.ORCID http://orcid.org/0000-0002-4197-5790
University of Geneva · CH

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Schizophrenia is a polygenic psychiatric disorder with limited understanding about the mechanistic changes in gene expression regulation. To elucidate on this, we integrate interindividual variability of regulatory activity (ChIP-sequencing for H3K27ac histone mark) with gene expression and genotype data captured from the prefrontal cortex of 272 cases and controls. By measuring interindividual correlation among proximal chromatin peaks, we show that regulatory element activity is structured into 10,936 and 10,376 cis-regulatory domains in cases and controls, respectively. The schizophrenia-specific cis-regulatory domains are enriched for fetal-specific (p = 0.0014, OR = 1.52) and depleted of adult-specific regulatory activity (p = 3.04 × 10

Indexed as

SchizophreniaAdultChromatinGene Expression RegulationGenetic Predisposition to DiseaseHumansMultifactorial InheritancePrefrontal CortexChromatin

Identifiers

PMID36114277
PMCPMC9763101
OpenAlexW4296161848

What Socratic holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the Socratic graph.