Evidence map›Paper›PMID 36163370›Full record

ArticleCommunications biology2022

Kinetics of phagosome maturation is coupled to their intracellular motility.

Yanqi Yu, Zihan Zhang, Glenn F W Walpole, Yan Yu

Open access · goldAbstract read
In one paragraph

Article in Communications biology, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 12 papers.

0numbers the graph read from it
0cells of the map it votes in
12citing papers in PubMed
2.6field-weighted citation impact, top 10% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

12 citing papers in PubMed, 23 citations in OpenAlex.

  1. Article
  2. Article
  3. Review
  4. Article
  5. Article
  6. Article
  7. Article
  8. Propulsive cell entry diverts pathogens from immune degradation by remodeling the phagocytic synapse.Proceedings of the National Academy of Sciences of the United States of America · 2023
    Article
  9. Article
  10. Nanoparticles for Interrogation of Cell Signaling.Annual review of analytical chemistry (Palo Alto, Calif.) · 2023
    Review
  11. Article
  12. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors at 2 institutions in 2 countries.

Yanqi Yu *Department of Chemistry, Indiana University, Bloomington, IN, 47405-7102, USA.
Zihan Zhang *Department of Chemistry, Indiana University, Bloomington, IN, 47405-7102, USA.ORCID 0000-0001-6667-1200
Glenn F W WalpoleProgram in Cell Biology, The Hospital for Sick Children, Toronto, Ontario, Canada.ORCID 0000-0001-8502-0892
Yan YuDepartment of Chemistry, Indiana University, Bloomington, IN, 47405-7102, USA. yy33@iu.edu.ORCID 0000-0001-6496-5045
Indiana University Bloomington · USUniversity of Toronto · CA

Funding

Unravelling Mechanisms of Endosomal Signaling with Designer NanomaterialsR35GM124918 · NIGMS · WASHINGTON UNIVERSITY · PI Yan Yu · 2017 to 2026
$3.8M
NIGMS NIH HHS R35 GM124918
6 · The paper itself

Abstract

Immune cells degrade internalized pathogens in phagosomes through sequential biochemical changes. The degradation must be fast enough for effective infection control. The presumption is that each phagosome degrades cargos autonomously with a distinct but stochastic kinetic rate. However, here we show that the degradation kinetics of individual phagosomes is not stochastic but coupled to their intracellular motility. By engineering RotSensors that are optically anisotropic, magnetic responsive, and fluorogenic in response to degradation activities in phagosomes, we monitored cargo degradation kinetics in single phagosomes simultaneously with their translational and rotational dynamics. We show that phagosomes that move faster centripetally are more likely to encounter and fuse with lysosomes, thereby acidifying faster and degrading cargos more efficiently. The degradation rates increase nearly linearly with the translational and rotational velocities of phagosomes. Our results indicate that the centripetal motion of phagosomes functions as a clock for controlling the progression of cargo degradation.

Indexed as

PhagocytosisPhagosomesCell MovementKineticsLysosomes

Identifiers

PMID36163370
PMCPMC9512794
OpenAlexW4297238535

What Socratic holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the Socratic graph.