Evidence map›Paper›PMID 36179694›Full record

ArticleStem cell reports2022

PI3Kβ-regulated β-catenin mediates EZH2 removal from promoters controlling primed human ESC stemness and primitive streak gene expression.

Sudhanshu Yadav, Antonio Garrido, M Carmen Hernández, Juan C Oliveros, Vicente Pérez-García, Mario F Fraga, Ana C Carrera

Open access · goldAbstract read
In one paragraph

Article in Stem cell reports, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 2 papers.

0numbers the graph read from it
0cells of the map it votes in
2citing papers in PubMed
0.2field-weighted citation impact, top 51% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

2 citing papers in PubMed, 2 citations in OpenAlex.

  1. Article
  2. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors at 4 institutions in 1 country.

Sudhanshu YadavDepartment of Immunology and Oncology, Universidad Autónoma de Madrid, Cantoblanco, 28049 Madrid, Spain.
Antonio GarridoDepartment of Immunology and Oncology, Universidad Autónoma de Madrid, Cantoblanco, 28049 Madrid, Spain.
M Carmen HernándezDepartment of Immunology and Oncology, Universidad Autónoma de Madrid, Cantoblanco, 28049 Madrid, Spain.
Juan C OliverosDepartment of Systems Biology, Bioinformatics, Centro Nacional de Biotecnología/CSIC, Universidad Autónoma de Madrid, Cantoblanco, 28049 Madrid, Spain.
Vicente Pérez-GarcíaCentro de Investigación Príncipe Felipe, Eduardo Primo Yúfera, 46013 Valencia, Spain.
Mario F FragaNanomaterials and Nanotechnology Research Center/CSIC, Health Research Institute of Asturias (ISPA), Institute of Oncology of Asturias (IUOPA), Research Center for Rare Diseases (CIBERER), 33011 Oviedo, Asturias, Spain.
Ana C CarreraDepartment of Immunology and Oncology, Universidad Autónoma de Madrid, Cantoblanco, 28049 Madrid, Spain. Electronic address: acarrera@cnb.csic.es.
Universidad Autónoma de Madrid · ESCentro Nacional de Biotecnología · ESCentro de Investigacion Principe Felipe · ESNanomaterials and Nanotechnology Research Center · ES

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

The mechanism governing the transition of human embryonic stem cells (hESCs) toward differentiated cells is only partially understood. To explore this transition, the activity and expression of the ubiquitous phosphatidylinositol 3-kinase (PI3Kα and PI3Kβ) were modulated in primed hESCs. The study reports a pathway that dismantles the restraint imposed by the EZH2 polycomb repressor on an essential stemness gene, NODAL, and on transcription factors required to trigger primitive streak formation. The primitive streak is the site where gastrulation begins to give rise to the three embryonic cell layers from which all human tissues derive. The pathway involves a PI3Kβ non-catalytic action that controls nuclear/active RAC1 levels, activation of JNK (Jun N-terminal kinase) and nuclear β-catenin accumulation. β-Catenin deposition at promoters triggers release of the EZH2 repressor, permitting stemness maintenance (through control of NODAL) and correct differentiation by allowing primitive streak master gene expression. PI3Kβ epigenetic control of EZH2/β-catenin might be modulated to direct stem cell differentiation.

Indexed as

beta CateninEmbryonic Stem CellsEnhancer of Zeste Homolog 2 ProteinPhosphatidylinositol 3-KinasesPrimitive StreakCell DifferentiationGene ExpressionHumansJNK Mitogen-Activated Protein Kinasesbeta CateninCTNNB1 protein, humanEnhancer of Zeste Homolog 2 ProteinEZH2 protein, humanJNK Mitogen-Activated Protein KinasesPhosphatidylinositol 3-Kinasesclinical hESC differentiation for regeneration medicineepigeneticsEZH2human stem cellsPI3Kβpolycomb repression releaseprimitive streakstemnessStemness/differentiation transitionβ-catenin

Identifiers

PMID36179694
PMCPMC9561645
OpenAlexW4298008722

What Socratic holds

Textmetadata
LicenceCC BY-NC-ND
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the Socratic graph.