Evidence map›Paper›PMID 36215317›Full record

ArticlePLoS neglected tropical diseases2022

Genome-wide association study for Chagas Cardiomyopathy identify a new risk locus on chromosome 18 associated with an immune-related protein and transcriptional signature.

Ester Cerdeira Sabino, Lucas Augusto Moysés Franco, Gabriela Venturini, Mariliza Velho Rodrigues, Emanuelle Marques, Lea Campos de Oliveira-da Silva, Larissa Natany Almeida Martins, Ariela Mota Ferreira, Paulo Emílio Clementino Almeida, Felipe Dias Da Silva and 11 more

Open access · goldAbstract read
In one paragraph

Article in PLoS neglected tropical diseases, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 8 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
8citing papers in PubMed, 1 pooled it
1.4field-weighted citation impact, top 18% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

8 citing papers in PubMed, 1 synthesis or guideline pooled it, 10 citations in OpenAlex.

  1. Pooled it
  2. Article
  3. Article
  4. Article
  5. Review
  6. Review
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  8. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

21 authors at 6 institutions in 3 countries.

Ester Cerdeira SabinoDepartamento de Moléstias Infecciosas e Parasitárias, Hospital das Clínicas da Faculdade de Medicina da Universidade de São Paulo (FMUSP), São Paulo, Brazil.
Lucas Augusto Moysés FrancoDepartamento de Moléstias Infecciosas e Parasitárias, Hospital das Clínicas da Faculdade de Medicina da Universidade de São Paulo (FMUSP), São Paulo, Brazil.ORCID 0000-0002-6034-920X
Gabriela VenturiniLaboratorio de Genetica e Cardiologia Molecular, Instituto do Coracao (InCor), Faculdade de Medicina da Universidade de São Paulo, São Paulo, Brazila.
Mariliza Velho RodriguesLaboratorio de Genetica e Cardiologia Molecular, Instituto do Coracao (InCor), Faculdade de Medicina da Universidade de São Paulo, São Paulo, Brazila.
Emanuelle MarquesLaboratorio de Genetica e Cardiologia Molecular, Instituto do Coracao (InCor), Faculdade de Medicina da Universidade de São Paulo, São Paulo, Brazila.
Lea Campos de Oliveira-da SilvaDepartamento de Moléstias Infecciosas e Parasitárias, Hospital das Clínicas da Faculdade de Medicina da Universidade de São Paulo (FMUSP), São Paulo, Brazil.
Larissa Natany Almeida MartinsDepartment of Statistics, Instituto de Ciência Exatas, Universidade Federal de Minas Gerais, Belo Horizonte, Brazil.
Ariela Mota FerreiraDepartamento de Moléstias Infecciosas e Parasitárias, Hospital das Clínicas da Faculdade de Medicina da Universidade de São Paulo (FMUSP), São Paulo, Brazil.
Paulo Emílio Clementino AlmeidaUniversidade Estadual de Montes Claros, Montes Claros, Minas Gerais, Brazil.
Felipe Dias Da SilvaDepartamento de Moléstias Infecciosas e Parasitárias, Hospital das Clínicas da Faculdade de Medicina da Universidade de São Paulo (FMUSP), São Paulo, Brazil.
Sâmara Fernandes LeiteHealth Science Program, Universidade Estadual de Montes Claros, Montes Claros, Brazil.
Maria do Carmo Pereira NunesFaculdade de Medicina, Universidade Federal de Minas Gerais, Belo Horizonte, Brazil.
Desiree Sant'Ana HaikalHealth Science Program, Universidade Estadual de Montes Claros, Montes Claros, Brazil.
Claudia Di Lorenzo OliveiraFederal University of São João del-Rei, Divinópolis, Brazil.
Clareci Silva CardosoFederal University of São João del-Rei, Divinópolis, Brazil.
Jonathan G SeidmanGenetics Department, Harvard Medical School, Boston, Massachusetts, United States of America.
Christine E SeidmanGenetics Department, Harvard Medical School, Boston, Massachusetts, United States of America.
Juan P CasasMassachusetts Veterans Epidemiology Research and Information Center, Veterans Affairs Boston Healthcare System, Boston, Massachusetts, United States of America.
Antonio Luiz Pinho RibeiroFaculdade de Medicina, Universidade Federal de Minas Gerais, Belo Horizonte, Brazil.
Jose E KriegerLaboratorio de Genetica e Cardiologia Molecular, Instituto do Coracao (InCor), Faculdade de Medicina da Universidade de São Paulo, São Paulo, Brazila.
Alexandre C PereiraLaboratorio de Genetica e Cardiologia Molecular, Instituto do Coracao (InCor), Faculdade de Medicina da Universidade de São Paulo, São Paulo, Brazila.ORCID 0000-0002-7782-5540
Hospital das Clínicas da Faculdade de Medicina da Universidade de São Paulo · BRHarvard University · USUniversidade Estadual de Montes Claros · BRUniversidade Federal de Minas Gerais · BRBrigham and Women's Hospital · USFederal University of São João del-Rei · BR

Funding

Sao Paulo-Minas Gerais Tropical Medicine Research Center for Chagas Disease Biomarker DiscoveryU19AI098461 · NIAID · FUNDACAO FACULDADE DE MEDICINA · PI PEREIRA, ALEXANDRE DA COSTA · 2017 to 2021
$2.1M
"Sao Paulo-Minas Gerais Center for Chagas Disease Treatment (SaMiTrop)"U01AI168383 · NIAID · FUNDACAO FACULDADE DE MEDICINA · PI Ester Cerdeira Sabino · 2022 to 2026
$1.9M
Genetic Determinants of Chagas CardiomyopathyR01HL133165 · NHLBI · HARVARD MEDICAL SCHOOL · PI SEIDMAN, CHRISTINE E · 2017 to 2020
$1.7M
Sao Paulo- MInas Gerais Neglected Tropical Disease Research Center for BiomarkerP50AI098461 · NIAID · FUNDACAO FACULDADE DE MEDICINA · PI SABINO, ESTER CERDEIRA · 2012 to 2016
$1.5M
Howard Hughes Medical InstituteNHLBI NIH HHS R01 HL133165NIAID NIH HHS P50 AI098461NIAID NIH HHS U01 AI168383NIAID NIH HHS U19 AI098461
6 · The paper itself

Abstract

backgroundChronic Chagas Cardiomyopathy (CCC) usually develops between 10 and 20 years after the first parasitic infection and is one of the leading causes of end-stage heart failure in Latin America. Despite the great inter-individual variability in CCC susceptibility (only 30% of infected individuals ever present CCC), there are no known predictors for disease development in those chronically infected. METHODOLOGY/PRINCIPAL

findingsWe describe a new susceptibility locus for CCC through a GWAS analysis in the SaMi-Trop cohort, a population-based study conducted in a Chagas endemic region from Brazil. This locus was also associated with CCC in the REDS II Study. The newly identified locus (rs34238187, OR 0.73, p-value 2.03 x 10-9) spans a haplotype of approximately 30Kb on chromosome 18 (chr18: 5028302-5057621) and is also associated with 80 different traits, most of them blood protein traits significantly enriched for immune-related biological pathways. Hi-C data show that the newly associated locus is able to interact with chromatin sites as far as 10Mb on chromosome 18 in a number of different cell types and tissues. Finally, we were able to confirm, at the tissue transcriptional level, the immune-associated blood protein signature using a multi-tissue differential gene expression and enrichment analysis. CONCLUSIONS/SIGNIFICANCE: We suggest that the newly identified locus impacts CCC risk among T cruzi infected individuals through the modulation of a downstream transcriptional and protein signature associated with host-parasite immune response. Functional characterization of the novel risk locus is warranted.

Indexed as

Chagas CardiomyopathyChagas DiseaseTrypanosoma cruziChromatinChromosomes, Human, Pair 18Genome-Wide Association StudyHumansChromatin

Identifiers

PMID36215317
PMCPMC9550069
OpenAlexW4304087086

What Socratic holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the Socratic graph.