Evidence map›Paper›PMID 36250618›Full record

ArticleeLife2022

Trio-based whole exome sequencing in patients with suspected sporadic inborn errors of immunity: A retrospective cohort study.

Anne Hebert, Annet Simons, Janneke H M Schuurs-Hoeijmakers, Hans J P M Koenen, Evelien Zonneveld-Huijssoon, Stefanie S V Henriet, Ellen J H Schatorjé, Esther P A H Hoppenreijs, Erika K S M Leenders, Etienne J M Janssen and 10 more

Open access · goldAbstract read
In one paragraph

Article in eLife, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 7 papers.

0numbers the graph read from it
0cells of the map it votes in
7citing papers in PubMed
0.7field-weighted citation impact, top 33% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

7 citing papers in PubMed, 8 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

20 authors at 5 institutions in 3 countries.

Anne HebertDepartment of Human Genetics, Radboud Institute of Molecular Life Sciences (RIMLS), Radboud University Medical Center, Nijmegen, Netherlands.ORCID 0000-0002-8945-015X
Annet SimonsDepartment of Human Genetics, Radboud Institute of Molecular Life Sciences (RIMLS), Radboud University Medical Center, Nijmegen, Netherlands.
Janneke H M Schuurs-HoeijmakersDepartment of Human Genetics, Radboud Institute of Molecular Life Sciences (RIMLS), Radboud University Medical Center, Nijmegen, Netherlands.
Hans J P M KoenenDepartment of Laboratory Medicine, Laboratory for Medical Immunology, Radboud University Medical Center, Nijmegen, Netherlands.
Evelien Zonneveld-HuijssoonDepartment of Genetics, University of Groningen, University Medical Center Groningen, Groningen, Netherlands.
Stefanie S V HenrietDepartment of Pediatric Infectious Diseases and Immunology, Amalia Children's Hospital, Radboud Center for Infectious Diseases (RCI), Radboud University Medical Center, Nijmegen, Netherlands.
Ellen J H SchatorjéDepartment of Pediatric Rheumatology and Immunology, Amalia Children's Hospital, Radboud University Medical Center, Nijmegen, Netherlands.
Esther P A H HoppenreijsDepartment of Pediatric Rheumatology and Immunology, Amalia Children's Hospital, Radboud University Medical Center, Nijmegen, Netherlands.
Erika K S M LeendersDepartment of Human Genetics, Radboud Institute of Molecular Life Sciences (RIMLS), Radboud University Medical Center, Nijmegen, Netherlands.
Etienne J M JanssenDepartment of Clinical Genetics, Maastricht University Medical Center+, Maastricht, Netherlands.
Gijs W E SantenCenter for Human and Clinical Genetics, Leiden University Medical Center, Leiden, Netherlands.
Sonja A de MunnikDepartment of Human Genetics, Radboud Institute of Molecular Life Sciences (RIMLS), Radboud University Medical Center, Nijmegen, Netherlands.
Simon V van ReijmersdalDepartment of Human Genetics, Radboud Institute of Molecular Life Sciences (RIMLS), Radboud University Medical Center, Nijmegen, Netherlands.
Esther van RijssenDepartment of Laboratory Medicine, Laboratory for Medical Immunology, Radboud University Medical Center, Nijmegen, Netherlands.
Simone KerstenDepartment of Human Genetics, Radboud Institute of Molecular Life Sciences (RIMLS), Radboud University Medical Center, Nijmegen, Netherlands.ORCID 0000-0002-0251-5564
Mihai G NeteaDepartment of Internal Medicine and Radboud Center for Infectious Diseases (RCI), Radboud University Medical Center, Nijmegen, Netherlands.ORCID 0000-0003-2421-6052
Ruben L SmeetsDepartment of Laboratory Medicine, Laboratory for Medical Immunology, Radboud University Medical Center, Nijmegen, Netherlands.
Frank L van de VeerdonkDepartment of Internal Medicine and Radboud Center for Infectious Diseases (RCI), Radboud University Medical Center, Nijmegen, Netherlands.ORCID 0000-0002-1121-4894
Alexander HoischenDepartment of Human Genetics, Radboud Institute of Molecular Life Sciences (RIMLS), Radboud University Medical Center, Nijmegen, Netherlands.ORCID 0000-0002-8072-4476
Caspar I van der MadeDepartment of Human Genetics, Radboud Institute of Molecular Life Sciences (RIMLS), Radboud University Medical Center, Nijmegen, Netherlands.ORCID 0000-0003-0763-4017
Radboud University Nijmegen · NLLeiden University Medical Center · NLUniversity Medical Center · USUniversity Medical Center Groningen · NLUniversity of Bonn · DE

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Background: Methods: This study explored the potential added value of systematic assessment of DNVs in a retrospective cohort of 123 patients with a suspected sporadic IEI that underwent patient-parent trio-based WES. Results: A (likely) molecular diagnosis for (part) of the immunological phenotype was achieved in 12 patients with the diagnostic Conclusions: Our findings in this retrospective cohort study advocate the implementation of trio-based sequencing in routine diagnostics of patients with sporadic IEI. Furthermore, we provide functional evidence supporting a causal role for Funding: This research was supported by grants from the European Union, ZonMW and the Radboud Institute for Molecular Life Sciences.

Indexed as

ExomeHereditary Autoinflammatory DiseasesExome SequencingHumansRetrospective StudiesSequence Analysis, DNAde novo variantshumaninborn errors of immunitymedicineprimary immunodeficienciestrio-based whole exome sequencing

Identifiers

PMID36250618
PMCPMC9635875
OpenAlexW4306406826

What Socratic holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the Socratic graph.