Evidence map›Paper›PMID 36255607›Full record

ReviewBiometals : an international journal on the role of metal ions in biology, biochemistry, and medicine2022

Nonsense-mediated mRNA decay and metal ion homeostasis and detoxification in Saccharomyces cerevisiae.

Xinyi Zhang, Bessie W Kebaara

Open access · hybridAbstract readReview
In one paragraph

Review in Biometals : an international journal on the role of metal ions in biology, biochemistry, and medicine, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 3 papers.

0numbers the graph read from it
0cells of the map it votes in
3citing papers in PubMed
0.6field-weighted citation impact, top 35% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

3 citing papers in PubMed, 8 citations in OpenAlex.

  1. Article
  2. Article
  3. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

2 authors at 1 institution in 1 country.

Xinyi ZhangDepartment of Biology, Baylor University, One Bear Place #97388, Waco, TX, 76798, USA.
Bessie W KebaaraDepartment of Biology, Baylor University, One Bear Place #97388, Waco, TX, 76798, USA. Bessie_Kebaara@baylor.edu.ORCID 0000-0001-6582-1764
Baylor University · US

Funding

Investigation of copper homeostasis mRNAs regulated by the Nonsense-mediated mRNA decay pathwayR15GM117524 · NIGMS · BAYLOR UNIVERSITY · PI KEBAARA, BESSIE W · 2016 to 2016
$413k
NIGMS NIH HHS R15 GM117524
6 · The paper itself

Abstract

The highly conserved Nonsense-mediated mRNA decay (NMD) pathway is a translation dependent mRNA degradation pathway. Although NMD is best known for its role in degrading mRNAs with premature termination codons (PTCs) generated during transcription, splicing, or damage to the mRNAs, NMD is now also recognized as a pathway with additional important functions. Notably, NMD precisely regulates protein coding natural mRNAs, hence controlling gene expression within several physiologically significant pathways. Such pathways affected by NMD include nutritional bio-metal homeostasis and metal ion detoxification, as well as crosstalk between these pathways. Here, we focus on the relationships between NMD and various metal homeostasis and detoxification pathways. We review the described role that the NMD pathway plays in magnesium, zinc, iron, and copper homeostasis, as well as cadmium detoxification.

Indexed as

Nonsense Mediated mRNA DecaySaccharomyces cerevisiae ProteinsGene Expression Regulation, FungalHomeostasisRNA, MessengerSaccharomyces cerevisiaeRNA, MessengerSaccharomyces cerevisiae ProteinsCopperIronMagnesiumMetal ionsNonsense-mediated mRNA decay (NMD)Zinc

Identifiers

PMID36255607
PMCPMC9674712
OpenAlexW4306708244

What Socratic holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the Socratic graph.