Evidence map›Paper›PMID 36259644›Full record

ArticleNucleic acids research2022

SMG6 localizes to the chromatoid body and shapes the male germ cell transcriptome to drive spermatogenesis.

Tiina Lehtiniemi, Matthieu Bourgery, Lin Ma, Ammar Ahmedani, Margareeta Mäkelä, Juho Asteljoki, Opeyemi Olotu, Samuli Laasanen, Fu-Ping Zhang, Kun Tan and 8 more

Open access · goldAbstract read
In one paragraph

Article in Nucleic acids research, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 11 papers.

0numbers the graph read from it
0cells of the map it votes in
11citing papers in PubMed
2.4field-weighted citation impact, top 10% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

11 citing papers in PubMed, 15 citations in OpenAlex.

  1. Review
  2. Article
  3. Article
  4. Review
  5. Article
  6. Article
  7. Article
  8. Article
  9. Review
  10. Article
  11. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

18 authors at 5 institutions in 3 countries.

Tiina LehtiniemiInstitute of Biomedicine, Integrative Physiology and Pharmacology Unit, University of Turku, Turku, Finland.
Matthieu BourgeryInstitute of Biomedicine, Integrative Physiology and Pharmacology Unit, University of Turku, Turku, Finland.
Lin MaInstitute of Biomedicine, Integrative Physiology and Pharmacology Unit, University of Turku, Turku, Finland.ORCID 0000-0003-0611-3746
Ammar AhmedaniInstitute of Biomedicine, Integrative Physiology and Pharmacology Unit, University of Turku, Turku, Finland.
Margareeta MäkeläInstitute of Biomedicine, Integrative Physiology and Pharmacology Unit, University of Turku, Turku, Finland.
Juho AsteljokiInstitute of Biomedicine, Integrative Physiology and Pharmacology Unit, University of Turku, Turku, Finland.
Opeyemi OlotuInstitute of Biomedicine, Integrative Physiology and Pharmacology Unit, University of Turku, Turku, Finland.
Samuli LaasanenInstitute of Biomedicine, Integrative Physiology and Pharmacology Unit, University of Turku, Turku, Finland.
Fu-Ping ZhangInstitute of Biomedicine, Integrative Physiology and Pharmacology Unit, University of Turku, Turku, Finland.
Kun TanDepartment of Obstetrics, Gynecology, and Reproductive Sciences, School of Medicine, University of California San Diego, La Jolla, CA 92093, USA.ORCID 0000-0002-8567-7795
Jennifer N ChousalDepartment of Obstetrics, Gynecology, and Reproductive Sciences, School of Medicine, University of California San Diego, La Jolla, CA 92093, USA.
Dana BurowDepartment of Obstetrics, Gynecology, and Reproductive Sciences, School of Medicine, University of California San Diego, La Jolla, CA 92093, USA.
Satu KoskinenTurku Bioscience Centre, University of Turku and Åbo Akademi University, Turku, Finland.
Asta LaihoTurku Bioscience Centre, University of Turku and Åbo Akademi University, Turku, Finland.
Laura L EloInstitute of Biomedicine, Integrative Physiology and Pharmacology Unit, University of Turku, Turku, Finland.
Frédéric ChalmelUniversity of Rennes, Inserm, EHESP, Irset (Institut de recherche en santé, environnement et travail) - UMR_S 1085, F-35000, Rennes, France.ORCID 0000-0002-0535-3628
Miles F WilkinsonDepartment of Obstetrics, Gynecology, and Reproductive Sciences, School of Medicine, University of California San Diego, La Jolla, CA 92093, USA.
Noora KotajaInstitute of Biomedicine, Integrative Physiology and Pharmacology Unit, University of Turku, Turku, Finland.ORCID 0000-0003-1503-9170
University of Turku · FIUniversity of California San Diego · USÅbo Akademi University · FIInserm · FRUniversity of Helsinki · FI

Funding

MEDICAL SCIENTIST TRAINING PROGRAMT32GM007198 · NIGMS · UNIVERSITY OF CALIFORNIA, SAN DIEGO · PI CHI, NEIL C, INSEL, PAUL A · 1985 to 2024
$29.3M
The Role of NMD in Embryonic DevelopmentR01HD093846 · NICHD · UNIVERSITY OF CALIFORNIA, SAN DIEGO · PI WILKINSON, MILES FROME · 2018 to 2022
$2.3M
NICHD NIH HHS R01 HD093846NIGMS NIH HHS T32 GM007198
6 · The paper itself

Abstract

Nonsense-mediated RNA decay (NMD) is a highly conserved and selective RNA turnover pathway that depends on the endonuclease SMG6. Here, we show that SMG6 is essential for male germ cell differentiation in mice. Germ-cell conditional knockout (cKO) of Smg6 induces extensive transcriptome misregulation, including a failure to eliminate meiotically expressed transcripts in early haploid cells, and accumulation of NMD target mRNAs with long 3' untranslated regions (UTRs). Loss of SMG6 in the male germline results in complete arrest of spermatogenesis at the early haploid cell stage. We find that SMG6 is strikingly enriched in the chromatoid body (CB), a specialized cytoplasmic granule in male germ cells also harboring PIWI-interacting RNAs (piRNAs) and the piRNA-binding protein PIWIL1. This raises the possibility that SMG6 and the piRNA pathway function together, which is supported by several findings, including that Piwil1-KO mice phenocopy Smg6-cKO mice and that SMG6 and PIWIL1 co-regulate many genes in round spermatids. Together, our results demonstrate that SMG6 is an essential regulator of the male germline transcriptome, and highlight the CB as a molecular platform coordinating RNA regulatory pathways to control sperm production and fertility.

Indexed as

EndoribonucleasesGerm Cell Ribonucleoprotein GranulesSpermatogenesisTranscriptomeAnimalsArgonaute ProteinsGerm CellsMaleMiceRNA, Small InterferingSpermatidsArgonaute ProteinsEndoribonucleasesPiwil1 protein, mouseRNA, Small InterferingSmg6 protein, mouse

Identifiers

PMID36259644
PMCPMC9723633
OpenAlexW4306790049

What Socratic holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the Socratic graph.