Evidence map›Paper›PMID 36261683›Full record

ArticleScientific reports2022

Elk-1 regulates retinal ganglion cell axon regeneration after injury.

Takahiko Noro, Sahil H Shah, Yuqin Yin, Riki Kawaguchi, Satoshi Yokota, Kun-Che Chang, Ankush Madaan, Catalina Sun, Giovanni Coppola, Daniel Geschwind and 2 more

Open access · goldAbstract read
In one paragraph

Article in Scientific reports, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 15 papers.

0numbers the graph read from it
0cells of the map it votes in
15citing papers in PubMed
2.0field-weighted citation impact, top 14% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

15 citing papers in PubMed, 22 citations in OpenAlex.

  1. Article
  2. Article
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  5. Review
  6. Article
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  9. Article
  10. Optic nerve regeneration: Potential treatment approaches.Current opinion in pharmacology · 2024
    Review
  11. BRCA1 and ELK-1 regulate neural progenitor cell fate in the optic tectum in response to visual experience inProceedings of the National Academy of Sciences of the United States of America · 2024
    Article
  12. Review
  13. Article
  14. Review
  15. Posttranslational modifications of proteins in diseased retina.Frontiers in cellular neuroscience · 2023
    Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

12 authors at 5 institutions in 2 countries.

Takahiko Noro *Spencer Center for Vision Research, Byers Eye Institute, Stanford University, 1651 Page Mill Rd, Palo Alto, CA, 94034, USA.
Sahil H Shah *Spencer Center for Vision Research, Byers Eye Institute, Stanford University, 1651 Page Mill Rd, Palo Alto, CA, 94034, USA. sshah90@stanford.edu.
Yuqin YinDepartment of Neurosurgery, Boston Children's Hospital, Harvard Medical School, Boston, MA, USA.
Riki KawaguchiDepartments of Neurology and Psychiatry, University of California Los Angeles, Los Angeles, CA, USA.
Satoshi YokotaSpencer Center for Vision Research, Byers Eye Institute, Stanford University, 1651 Page Mill Rd, Palo Alto, CA, 94034, USA.
Kun-Che ChangDepartment of Ophthalmology, University of Pittsburgh School of Medicine, Pittsburgh, PA, USA.
Ankush MadaanSpencer Center for Vision Research, Byers Eye Institute, Stanford University, 1651 Page Mill Rd, Palo Alto, CA, 94034, USA.
Catalina SunSpencer Center for Vision Research, Byers Eye Institute, Stanford University, 1651 Page Mill Rd, Palo Alto, CA, 94034, USA.
Giovanni CoppolaDepartments of Neurology and Psychiatry, University of California Los Angeles, Los Angeles, CA, USA.
Daniel GeschwindDepartments of Neurology and Psychiatry, University of California Los Angeles, Los Angeles, CA, USA.
Larry I BenowitzDepartment of Neurosurgery, Boston Children's Hospital, Harvard Medical School, Boston, MA, USA.
Jeffrey L GoldbergSpencer Center for Vision Research, Byers Eye Institute, Stanford University, 1651 Page Mill Rd, Palo Alto, CA, 94034, USA.
Smith-Kettlewell Eye Research Institute · USUniversity of California, Los Angeles · USBoston Children's Hospital · USStanford University · USUniversity of Pittsburgh · US

Funding

Genetic Analysis and Manipulation Core (GAEC)P50HD105351 · NICHD · BOSTON CHILDREN'S HOSPITAL · PI Hisashi Umemori · 2021 to 2026
$9.4M
Stanford Vision Research CoreP30EY026877 · NEI · STANFORD UNIVERSITY · PI Jeffrey L Goldberg · 2017 to 2026
$8.0M
Molecular Discovery for Optic Nerve RegenerationU01EY027261 · NEI · STANFORD UNIVERSITY · PI GOLDBERG, JEFFREY L, HUBERMAN, ANDREW D · 2016 to 2019
$3.0M
Stanford Vision Training ProgramT32EY027816 · NEI · STANFORD UNIVERSITY · PI Jeffrey L Goldberg · 2018 to 2026
$2.0M
NEI NIH HHS P30 EY026877NEI NIH HHS T32 EY027816NEI NIH HHS U01 EY027261NICHD NIH HHS P50 HD105351
6 · The paper itself

Abstract

Adult central nervous system (CNS) axons fail to regenerate after injury, and master regulators of the regenerative program remain to be identified. We analyzed the transcriptomes of retinal ganglion cells (RGCs) at 1 and 5 days after optic nerve injury with and without a cocktail of strongly pro-regenerative factors to discover genes that regulate survival and regeneration. We used advanced bioinformatic analysis to identify the top transcriptional regulators of upstream genes and cross-referenced these with the regulators upstream of genes differentially expressed between embryonic RGCs that exhibit robust axon growth vs. postnatal RGCs where this potential has been lost. We established the transcriptional activator Elk-1 as the top regulator of RGC gene expression associated with axon outgrowth in both models. We demonstrate that Elk-1 is necessary and sufficient to promote RGC neuroprotection and regeneration in vivo, and is enhanced by manipulating specific phosphorylation sites. Finally, we co-manipulated Elk-1, PTEN, and REST, another transcription factor discovered in our analysis, and found Elk-1 to be downstream of PTEN and inhibited by REST in the survival and axon regenerative pathway in RGCs. These results uncover the basic mechanisms of regulation of survival and axon growth and reveal a novel, potent therapeutic strategy to promote neuroprotection and regeneration in the adult CNS.

Indexed as

Optic Nerve InjuriesRetinal Ganglion CellsAxonsHumansNerve RegenerationTranscription FactorsTranscription Factors

Identifiers

PMID36261683
PMCPMC9581912
OpenAlexW4306784185

What Socratic holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the Socratic graph.