Evidence mapPaperPMID 36280732Full record

ArticleNature genetics2022

Multiomics study of nonalcoholic fatty liver disease.

Gardar Sveinbjornsson, Magnus O Ulfarsson, Rosa B Thorolfsdottir, Benedikt A Jonsson, Eythor Einarsson, Gylfi Gunnlaugsson, Solvi Rognvaldsson, David O Arnar, Magnus Baldvinsson, Ragnar G Bjarnason and 37 more

Open access · hybridAbstract read
In one paragraph

Article in Nature genetics, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 140 papers, 3 of them syntheses that pooled it.

0numbers the graph read from it
0cells of the map it votes in
140citing papers in PubMed, 3 pooled it
33.0field-weighted citation impact, top 1% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

140 citing papers in PubMed, 3 syntheses or guidelines pooled it, 216 citations in OpenAlex.

  1. Pooled it
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80 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

47 authors at 8 institutions in 3 countries.

Gardar Sveinbjornsson *deCODE genetics/Amgen, Inc., Reykjavik, Iceland. gardars@decode.is.ORCID http://orcid.org/0000-0003-2429-9468
Magnus O Ulfarsson *deCODE genetics/Amgen, Inc., Reykjavik, Iceland.
Rosa B ThorolfsdottirdeCODE genetics/Amgen, Inc., Reykjavik, Iceland.
Benedikt A JonssondeCODE genetics/Amgen, Inc., Reykjavik, Iceland.
Eythor EinarssondeCODE genetics/Amgen, Inc., Reykjavik, Iceland.
Gylfi GunnlaugssondeCODE genetics/Amgen, Inc., Reykjavik, Iceland.
Solvi RognvaldssondeCODE genetics/Amgen, Inc., Reykjavik, Iceland.
David O ArnardeCODE genetics/Amgen, Inc., Reykjavik, Iceland.
Magnus BaldvinssonRöntgen Domus, Reykjavík, Iceland.
Ragnar G BjarnasonFaculty of Medicine, University of Iceland, Reykjavik, Iceland.
DBDS Genomic consortium
Thjodbjorg EiriksdottirdeCODE genetics/Amgen, Inc., Reykjavik, Iceland.ORCID http://orcid.org/0000-0003-1009-7398
Christian ErikstrupDepartment of Clinical Immunology, Aarhus University Hospital, Aarhus, Denmark.ORCID http://orcid.org/0000-0001-6551-6647
Egil FerkingstaddeCODE genetics/Amgen, Inc., Reykjavik, Iceland.
Gisli H HalldorssondeCODE genetics/Amgen, Inc., Reykjavik, Iceland.
Hannes HelgasondeCODE genetics/Amgen, Inc., Reykjavik, Iceland.
Anna HelgadottirdeCODE genetics/Amgen, Inc., Reykjavik, Iceland.ORCID http://orcid.org/0000-0002-1806-2467
Lotte HindhedeDepartment of Clinical Immunology, Aarhus University Hospital, Aarhus, Denmark.ORCID http://orcid.org/0000-0001-9439-3906
Grimur HjorleifssondeCODE genetics/Amgen, Inc., Reykjavik, Iceland.ORCID http://orcid.org/0000-0002-9580-6685
David JonesIntermountain Healthcare, St. George, UT, USA.
Kirk U KnowltonIntermountain Healthcare, Salt Lake City, UT, USA.
Sigrun H LunddeCODE genetics/Amgen, Inc., Reykjavik, Iceland.ORCID http://orcid.org/0000-0002-3806-2296
Pall MelsteddeCODE genetics/Amgen, Inc., Reykjavik, Iceland.
Kristjan NorlanddeCODE genetics/Amgen, Inc., Reykjavik, Iceland.
Isleifur OlafssonClinical Laboratory Services, Diagnostics and Blood Bank, Landspitali-The National University Hospital of Iceland, Reykjavik, Iceland.
Sigurdur OlafssonInternal Medicine and Emergency Services, Landspitali-The National University Hospital of Iceland, Reykjavik, Iceland.
Gudjon R OskarssondeCODE genetics/Amgen, Inc., Reykjavik, Iceland.ORCID http://orcid.org/0000-0002-1842-8799
Sisse Rye OstrowskiDepartment of Clinical Immunology, Copenhagen University Hospital, Rigshospitalet, Cophenhagen, Denmark.ORCID http://orcid.org/0000-0001-5288-3851
Ole Birger PedersenDepartment of Clinical Medicine, University of Copenhagen, Copenhagen, Denmark.ORCID http://orcid.org/0000-0003-2312-5976
Auðunn S SnaebjarnarsondeCODE genetics/Amgen, Inc., Reykjavik, Iceland.ORCID http://orcid.org/0000-0002-3496-2991
Emil SigurdssonDevelopment Centre for Primary Health Care in Iceland, Reykjavík, Iceland.
Valgerdur SteinthorsdottirdeCODE genetics/Amgen, Inc., Reykjavik, Iceland.ORCID http://orcid.org/0000-0003-1846-6274
Michael SchwinnDepartment of Clinical Immunology, Copenhagen University Hospital, Rigshospitalet, Cophenhagen, Denmark.
Gudmundur ThorgeirssondeCODE genetics/Amgen, Inc., Reykjavik, Iceland.
Gudmar ThorleifssondeCODE genetics/Amgen, Inc., Reykjavik, Iceland.ORCID http://orcid.org/0000-0003-4623-9087
Ingileif JonsdottirdeCODE genetics/Amgen, Inc., Reykjavik, Iceland.ORCID http://orcid.org/0000-0001-8339-150X
Henning BundgaardDepartment of Clinical Medicine, University of Copenhagen, Copenhagen, Denmark.
Lincoln NadauldIntermountain Healthcare, St. George, UT, USA.
Einar S BjornssonFaculty of Medicine, University of Iceland, Reykjavik, Iceland.
Ingrid C RulifsonAmgen, Cardiometabolic Disorders, South San Francisco, CA, USA.
Thorunn RafnardeCODE genetics/Amgen, Inc., Reykjavik, Iceland.ORCID http://orcid.org/0000-0003-0491-7046
Gudmundur L NorddahldeCODE genetics/Amgen, Inc., Reykjavik, Iceland.
Unnur ThorsteinsdottirdeCODE genetics/Amgen, Inc., Reykjavik, Iceland.
Patrick SulemdeCODE genetics/Amgen, Inc., Reykjavik, Iceland.
Daniel F GudbjartssondeCODE genetics/Amgen, Inc., Reykjavik, Iceland.
Hilma HolmdeCODE genetics/Amgen, Inc., Reykjavik, Iceland.ORCID http://orcid.org/0000-0002-9517-6636
Kari StefanssondeCODE genetics/Amgen, Inc., Reykjavik, Iceland. kstefans@decode.is.ORCID http://orcid.org/0000-0003-1676-864X
deCODE Genetics (Iceland) · ISIntermountain Healthcare · USUniversity of Copenhagen · DKUniversity of Iceland · ISAarhus University Hospital · DKNational University Hospital of Iceland · ISAmgen (United States) · USCopenhagen University Hospital · DK

Funding

Medical Research Council MC_PC_17228Medical Research Council MC_QA137853
6 · The paper itself

Abstract

Nonalcoholic fatty liver (NAFL) and its sequelae are growing health problems. We performed a genome-wide association study of NAFL, cirrhosis and hepatocellular carcinoma, and integrated the findings with expression and proteomic data. For NAFL, we utilized 9,491 clinical cases and proton density fat fraction extracted from 36,116 liver magnetic resonance images. We identified 18 sequence variants associated with NAFL and 4 with cirrhosis, and found rare, protective, predicted loss-of-function variants in MTARC1 and GPAM, underscoring them as potential drug targets. We leveraged messenger RNA expression, splicing and predicted coding effects to identify 16 putative causal genes, of which many are implicated in lipid metabolism. We analyzed levels of 4,907 plasma proteins in 35,559 Icelanders and 1,459 proteins in 47,151 UK Biobank participants, identifying multiple proteins involved in disease pathogenesis. We show that proteomics can discriminate between NAFL and cirrhosis. The present study provides insights into the development of noninvasive evaluation of NAFL and new therapeutic options.

Indexed as

Liver NeoplasmsNon-alcoholic Fatty Liver DiseaseGenome-Wide Association StudyHumansLiverLiver CirrhosisProteomics

Identifiers

PMID36280732
PMCPMC9649432
OpenAlexW4307228554

What Socratic holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the Socratic graph.