Evidence map›Paper›PMID 36291123›Full record

ArticleCells2022

The NeuroinflammatoryPotential of HIV-1 NefVariants in Modulating the Gene Expression Profile of Astrocytes.

Sushama Jadhav, Prajakta Makar, Vijay Nema

Open access · goldAbstract read
In one paragraph

Article in Cells, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 3 papers.

0numbers the graph read from it
0cells of the map it votes in
3citing papers in PubMed
0.4field-weighted citation impact, top 39% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

3 citing papers in PubMed, 6 citations in OpenAlex.

  1. Article
  2. Review
  3. Neuro-HIV-New insights into pathogenesis and emerging therapeutic targets.FASEB journal : official publication of the Federation of American Societies for Experimental Biology · 2023
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

3 authors at 3 institutions in 1 country.

Sushama JadhavIndian Council of Medical Research, Department of Molecular Biology, National AIDS Research Institute, 73, G Block, MIDC, Bhosari, P.O. Box No. 1895, Pune 411026, Maharashtra, India.ORCID 0000-0002-8966-7017
Prajakta MakarInstitute of Bioinformatics and Biotechnology (IBB), S. Phule Pune University, Pune 411007, Maharashtra, India.
Vijay NemaIndian Council of Medical Research, Department of Molecular Biology, National AIDS Research Institute, 73, G Block, MIDC, Bhosari, P.O. Box No. 1895, Pune 411026, Maharashtra, India.ORCID 0000-0001-6420-9397
Indian Council of Medical Research · INInstitute of Bioinformatics · INSymbiosis International University · IN

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

HIV-1 mediated neurotoxicity is thought to be associated with HIV-1 viral proteins activating astrocytes and microglia by inducing inflammatory cytokines leading to the development of HIV-associated neurocognitive disorder (HAND). In the current study, we observe how HIV-1 Nef upregulates the levels of IL-6, IP-10, and TNF-α around 6.0fold in normal human astrocytes (NHAs) compared to cell and empty vector controls. Moderate downregulation in the expression profile of inflammatory cytokines was observed due to RNA interference. Furthermore, we determine the impact of inflammatory cytokines in the upregulation of kynurenine pathway metabolites, such as indoleamine 2,3-dioxygenase (IDO), and 3-hydroxyanthranilic acid oxygenase (HAAO) in NHA, and found the same to be 3.0- and 3.2-fold, respectively. Additionally, the variation in the level of nitric oxide before and after RNA interference was significant. The upregulated cytokines and pathway-specific metabolites could be linked with the neurotoxic potential of HIV-1 Nef. Thus, the downregulation in cytokines and kynurenine metabolites observed after siRNA-Nef interference indicates the possibility of combining the RNA interference approach with current antiretroviral therapy to prevent neurotoxicity development.

Indexed as

AstrocytesHIV-1HIV Infectionsnef Gene Products, Human Immunodeficiency VirusNeuroinflammatory Diseases3-Hydroxyanthranilate 3,4-DioxygenaseChemokine CXCL10CytokinesGene Expression ProfilingHumansIndoleamine-Pyrrole 2,3,-DioxygenaseInterleukin-6KynurenineNitric OxideRNA, Small InterferingTranscriptome3-Hydroxyanthranilate 3,4-DioxygenaseChemokine CXCL10CytokinesIndoleamine-Pyrrole 2,3,-DioxygenaseInterleukin-6Kynureninenef Gene Products, Human Immunodeficiency Virusnef protein, Human immunodeficiency virus 1Nitric OxideRNA, Small InterferingTumor Necrosis Factor-alphaHANDIHDSneuroinflammationneurotoxicityRNA interference

Identifiers

PMID36291123
PMCPMC9600268
OpenAlexW4306403584

What Socratic holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the Socratic graph.