Evidence map›Paper›PMID 36308385›Full record

ArticleAsian Pacific journal of cancer prevention : APJCP2022

DNA Repair Genes Polymorphisms: Impact on Acute Myeloid Leukemia Patients Outcome.

Salah Aref, Nadia El Menshawy, Tarek Abou Zeid, Enas Gouda, Nora Abdel Aziz

Open access · goldAbstract read
In one paragraph

Article in Asian Pacific journal of cancer prevention : APJCP, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 1 paper.

0numbers the graph read from it
0cells of the map it votes in
1citing papers in PubMed
0.2field-weighted citation impact, top 51% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

1 citing paper in PubMed, 2 citations in OpenAlex.

  1. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors at 1 institution in 1 country.

Salah ArefHematology Unit, Clinical Pathology Department, Faculty of Medicine, Mansoura University, Egypt.ORCID 0000-0002-4822-5204
Nadia El MenshawyHematology Unit, Clinical Pathology Department, Faculty of Medicine, Mansoura University, Egypt.
Tarek Abou ZeidUnit, Mansoura University Oncology Center (MUOC), Mansoura University, Egypt.
Enas GoudaHematology Unit, Clinical Pathology Department, Faculty of Medicine, Mansoura University, Egypt.
Nora Abdel AzizHematology Unit, Clinical Pathology Department, Faculty of Medicine, Mansoura University, Egypt.
Mansoura University · EG

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

backgroundATM; XRCC6 and LIG4 genes play an important role in repairing the double-strand DNA breaks and maintaining the genome stability. Single nucleotide polymorphisms (SNPs) in these genes could affect these genes expression and function. The aim of this study was to address the effect of SNP of the DNA repairing genes on corresponding  gene expression as well as AML patient's outcome. SUBJECTS AND

methodsThis is cross sectional study included 95 newly diagnosed AML patients. For all subjects included in our study SNPs  and expression of ATM (rs189037G>A), XRCC6 (rs2267437C>G) and LIG4 (rs1805388C>T) genes were evaluated by RFLP and real time PCR.

resultsThe following SNPs in ATM (AA); XRCC6 (GG); and LIG4 (TT) are associated with down regulation of the corresponding genes (P<0.001). The lower expression of ATM and LIG4 genes are associated with shorter OS and DFS. Cox regression multivariate analysis revealed that lower expression of ATM HR : 2.02 (CI: 1.12-3.64; p=0.020.

conclusionThe following SNPs of ATM (AA); XRCC6 (GG); and LIG4 (TT) are associated with down regulation of corresponding genes expression. ATM and XRCC6 lower expression are predictors of OS while ATM is predictor of DFS and could be used for optimizing the AML therapy.

Indexed as

Leukemia, Myeloid, AcutePolymorphism, Single NucleotideCross-Sectional StudiesDNA Ligase ATPDNA RepairGenetic Predisposition to DiseaseGenotypeHumansDNA Ligase ATPAMLATMLIG4XRCC6

Identifiers

PMID36308385
PMCPMC9924318
OpenAlexW4307805333

What Socratic holds

Textmetadata
LicenceCC BY-NC
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the Socratic graph.