Evidence map›Paper›PMID 36309694›Full record

ArticleJournal of translational medicine2022

m6A-immune-related lncRNA prognostic signature for predicting immune landscape and prognosis of bladder cancer.

Zi-Hao Feng, Yan-Ping Liang, Jun-Jie Cen, Hao-Hua Yao, Hai-Shan Lin, Jia-Ying Li, Hui Liang, Zhu Wang, Qiong Deng, Jia-Zheng Cao and 5 more

Open access · goldAbstract read
In one paragraph

Article in Journal of translational medicine, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 50 papers.

0numbers the graph read from it
0cells of the map it votes in
50citing papers in PubMed
6.5field-weighted citation impact, top 2% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

50 citing papers in PubMed, 67 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

15 authors at 3 institutions in 1 country.

Zi-Hao Feng *Department of Urology, The First Affiliated Hospital, Sun Yat-sen University, Guangzhou, Guangdong, China.
Yan-Ping Liang *Department of Urology, The First Affiliated Hospital, Sun Yat-sen University, Guangzhou, Guangdong, China.
Jun-Jie Cen *Department of Urology, The First Affiliated Hospital, Sun Yat-sen University, Guangzhou, Guangdong, China.
Hao-Hua Yao *Department of Urology, The First Affiliated Hospital, Sun Yat-sen University, Guangzhou, Guangdong, China.
Hai-Shan LinDepartment of Urology, The First Affiliated Hospital, Sun Yat-sen University, Guangzhou, Guangdong, China.
Jia-Ying LiDepartment of Urology, The First Affiliated Hospital, Sun Yat-sen University, Guangzhou, Guangdong, China.
Hui LiangDepartment of Urology, Affiliated Longhua People's Hospital, Southern Medical University, Shenzhen, Guangdong, China.
Zhu WangDepartment of Urology, Affiliated Longhua People's Hospital, Southern Medical University, Shenzhen, Guangdong, China.
Qiong DengDepartment of Urology, Affiliated Longhua People's Hospital, Southern Medical University, Shenzhen, Guangdong, China.
Jia-Zheng CaoDepartment of Urology, Jiangmen Central Hospital, Jiangmen, Guangdong, China.
Yong HuangDepartment of Urology, The First Affiliated Hospital, Sun Yat-sen University, Guangzhou, Guangdong, China.
Jin-Huan WeiDepartment of Urology, The First Affiliated Hospital, Sun Yat-sen University, Guangzhou, Guangdong, China.
Jun-Hang LuoDepartment of Urology, The First Affiliated Hospital, Sun Yat-sen University, Guangzhou, Guangdong, China. luojunh@mail.sysu.edu.cn.
Wei ChenDepartment of Urology, The First Affiliated Hospital, Sun Yat-sen University, Guangzhou, Guangdong, China. chenw3@mail.sysu.edu.cn.
Zhen-Hua ChenDepartment of Urology, The First Affiliated Hospital, Sun Yat-sen University, Guangzhou, Guangdong, China. chenzhh75@mail.sysu.edu.cn.ORCID 0000-0002-8889-5122
Sun Yat-sen University · CNSouthern Medical University · CNJiangmen Central Hospital · CN

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

backgroundN6-methyladenosine (m6A) related long noncoding RNAs (lncRNAs) may have prognostic value in bladder cancer for their key role in tumorigenesis and innate immunity.

methodsBladder cancer transcriptome data and the corresponding clinical data were acquired from the Cancer Genome Atlas (TCGA) database. The m6A-immune-related lncRNAs were identified using univariate Cox regression analysis and Pearson correlation analysis. A risk model was established using least absolute shrinkage and selection operator (LASSO) Cox regression analyses, and analyzed using nomogram, time-dependent receiver operating characteristics (ROC) and Kaplan-Meier survival analysis. The differences in infiltration scores, clinical features, and sensitivity to Talazoparib of various immune cells between low- and high-risk groups were investigated.

resultsTotally 618 m6A-immune-related lncRNAs and 490 immune-related lncRNAs were identified from TCGA, and 47 lncRNAs of their intersection demonstrated prognostic values. A risk model with 11 lncRNAs was established by Lasso Cox regression, and can predict the prognosis of bladder cancer patients as demonstrated by time-dependent ROC and Kaplan-Meier analysis. Significant correlations were determined between risk score and tumor malignancy or immune cell infiltration. Meanwhile, significant differences were observed in tumor mutation burden and stemness-score between the low-risk group and high-risk group. Moreover, high-risk group patients were more responsive to Talazoparib.

conclusionsAn m6A-immune-related lncRNA risk model was established in this study, which can be applied to predict prognosis, immune landscape and chemotherapeutic response in bladder cancer.

Indexed as

RNA, Long NoncodingUrinary Bladder NeoplasmsBiomarkers, TumorGene Expression Regulation, NeoplasticHumansPrognosisBiomarkers, TumorRNA, Long NoncodingBladder cancer (BLCA)Immune cell infiltrationImmune microenvironmentLong noncoding RNA (lncRNA)m6A (N6-methyladenosine)Prognosis prediction

Identifiers

PMID36309694
PMCPMC9617388
OpenAlexW4307950604

What Socratic holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the Socratic graph.