Evidence map›Paper›PMID 36313803›Full record

ArticleCell reports methods2022

SCAMPR, a single-cell automated multiplex pipeline for RNA quantification and spatial mapping.

Ramin Ali Marandi Ghoddousi, Valerie M Magalong, Anna K Kamitakahara, Pat Levitt

Open access · goldAbstract read
In one paragraph

Article in Cell reports methods, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 10 papers.

0numbers the graph read from it
0cells of the map it votes in
10citing papers in PubMed
0.9field-weighted citation impact, top 28% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

10 citing papers in PubMed, 11 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors at 2 institutions in 1 country.

Ramin Ali Marandi GhoddousiChildren's Hospital Los Angeles, Los Angeles, CA 90027, USA.
Valerie M MagalongChildren's Hospital Los Angeles, Los Angeles, CA 90027, USA.
Anna K KamitakaharaChildren's Hospital Los Angeles, Los Angeles, CA 90027, USA.
Pat LevittChildren's Hospital Los Angeles, Los Angeles, CA 90027, USA.
University of Southern California · USChildren's Hospital of Los Angeles · US

Funding

Function &Structure Adaptation in Forebrain DevelopmentR01MH067842 · NIMH · VANDERBILT UNIVERSITY · PI LEVITT, PAT · 2002 to 2023
$10.8M
Impact of Early Life Experience on Vagal Neurons and CircuitsR01DK126085 · NIDDK · CHILDREN'S HOSPITAL OF LOS ANGELES · PI LEVITT, PAT, RINAMAN, LINDA M · 2021 to 2024
$2.9M
Function and Structure Adaptations in Forebrain DevelopmentR56MH067842 · NIMH · CHILDREN'S HOSPITAL OF LOS ANGELES · PI LEVITT, PAT · 2014 to 2014
$662k
NIDDK NIH HHS R01 DK126085NIMH NIH HHS R01 MH067842NIMH NIH HHS R56 MH067842
6 · The paper itself

Abstract

Spatial gene expression, achieved classically through

Indexed as

NeuronsRNAIn Situ HybridizationRNA, MessengerRNARNA, MessengerbioinformaticsheterogeneityHiPlexin situ hybridizationneuronal topographyquantitative analysisRNAscopesegmentationspatial mappingspatial transcriptomics

Identifiers

PMID36313803
PMCPMC9606134
OpenAlexW4306250077

What Socratic holds

Textmetadata
LicenceCC BY-NC-ND
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the Socratic graph.