Evidence map›Paper›PMID 36314747›Full record

ArticleMicrobiologyOpen2022

Bacterial composition in Swedish raw drinking water reveals three major interacting ubiquitous metacommunities.

Björn Brindefalk, Harald Brolin, Melle Säve-Söderbergh, Edvin Karlsson, David Sundell, Per Wikström, Karin Jacobsson, Jonas Toljander, Per Stenberg, Andreas Sjödin and 3 more

Abstract read
In one paragraph

Article in MicrobiologyOpen, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 3 papers.

0numbers the graph read from it
0cells of the map it votes in
3citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

3 citing papers in PubMed.

  1. Article
  2. Article
  3. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

13 authors.

Björn BrindefalkCBRN Security and Defence, FOI, Swedish Defence Research Agency, Umeå, Sweden.ORCID 0000-0001-8524-778X
Harald BrolinDepartment of Molecular and Clinical Medicine, Institute of Medicine, Sahlgrenska Academy, University of Gothenburg, Gothenburg, Sweden.
Melle Säve-SöderberghScience Division, Swedish Food Agency, Uppsala, Sweden.
Edvin KarlssonCBRN Security and Defence, FOI, Swedish Defence Research Agency, Umeå, Sweden.
David SundellCBRN Security and Defence, FOI, Swedish Defence Research Agency, Umeå, Sweden.
Per WikströmCBRN Security and Defence, FOI, Swedish Defence Research Agency, Umeå, Sweden.
Karin JacobssonDepartment of Biomedical Science and Veterinary Public Health, Swedish University of Agricultural Sciences, Uppsala, Sweden.
Jonas ToljanderScience Division, Swedish Food Agency, Uppsala, Sweden.
Per StenbergCBRN Security and Defence, FOI, Swedish Defence Research Agency, Umeå, Sweden.
Andreas SjödinCBRN Security and Defence, FOI, Swedish Defence Research Agency, Umeå, Sweden.
Rikard DryseliusScience Division, Swedish Food Agency, Uppsala, Sweden.
Mats ForsmanCBRN Security and Defence, FOI, Swedish Defence Research Agency, Umeå, Sweden.
Jon AhlinderCBRN Security and Defence, FOI, Swedish Defence Research Agency, Umeå, Sweden.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

backgroundSurface raw water used as a source for drinking water production is a critical resource, sensitive to contamination. We conducted a study on Swedish raw water sources, aiming to identify mutually co-occurring metacommunities of bacteria, and environmental factors driving such patterns.

methodsThe water sources were different regarding nutrient composition, water quality, and climate characteristics, and displayed various degrees of anthropogenic impact. Water inlet samples were collected at six drinking water treatment plants over 3 years, totaling 230 samples. The bacterial communities of DNA sequenced samples (n = 175), obtained by 16S metabarcoding, were analyzed using a joint model for taxa abundance.

resultsTwo major groups of well-defined metacommunities of microorganisms were identified, in addition to a third, less distinct, and taxonomically more diverse group. These three metacommunities showed various associations to the measured environmental data. Predictions for the well-defined metacommunities revealed differing sets of favored metabolic pathways and life strategies. In one community, taxa with methanogenic metabolism were common, while a second community was dominated by taxa with carbohydrate and lipid-focused metabolism.

conclusionThe identification of ubiquitous persistent co-occurring bacterial metacommunities in freshwater habitats could potentially facilitate microbial source tracking analysis of contamination issues in freshwater sources.

Indexed as

Drinking WaterBacteriaEcosystemFresh WaterRNA, Ribosomal, 16SSwedenDrinking WaterRNA, Ribosomal, 16S16S rRNAanthropogenic effectsbacterial community analysisbiotic interactionsgeneralized linear latent variable model

Identifiers

PMID36314747
PMCPMC9511821

What Socratic holds

Textmetadata
LicenceCC BY
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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the Socratic graph.