Evidence map›Paper›PMID 36314783›Full record

ArticleDevelopment (Cambridge, England)2022

Complementary roles for auxin and auxin signalling revealed by reverse engineering lateral root stable prebranch site formation.

Joana Santos Teixeira, Thea van den Berg, Kirsten Ten Tusscher

Abstract read
In one paragraph

Article in Development (Cambridge, England), 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 7 papers.

0numbers the graph read from it
0cells of the map it votes in
7citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

7 citing papers in PubMed.

  1. Article
  2. Review
  3. Review
  4. Article
  5. Article
  6. Review
  7. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

3 authors.

Joana Santos TeixeiraComputational Developmental Biology Group, Faculty of Science, Utrecht University, Utrecht 3584 CH, The Netherlands.
Thea van den BergComputational Developmental Biology Group, Faculty of Science, Utrecht University, Utrecht 3584 CH, The Netherlands.ORCID 0000-0001-7254-8794
Kirsten Ten TusscherComputational Developmental Biology Group, Faculty of Science, Utrecht University, Utrecht 3584 CH, The Netherlands.ORCID 0000-0002-1945-7858

Funding

ZonMw 737.016.012
6 · The paper itself

Abstract

Priming is the process through which periodic elevations in auxin signalling prepattern future sites for lateral root formation, called prebranch sites. Thus far, the extent to which elevations in auxin concentration and/or auxin signalling are required for priming and prebranch site formation has remained a matter of debate. Recently, we discovered a reflux-and-growth mechanism for priming generating periodic elevations in auxin concentration that subsequently dissipate. Here, we reverse engineer a mechanism for prebranch site formation that translates these transient elevations into a persistent increase in auxin signalling, resolving the prior debate into a two-step process of auxin concentration-mediated initial signal and auxin signalling capacity-mediated memorization. A crucial aspect of the prebranch site formation mechanism is its activation in response to time-integrated rather than instantaneous auxin signalling. The proposed mechanism is demonstrated to be consistent with prebranch site auxin signalling dynamics, lateral inhibition, and symmetry-breaking mechanisms and perturbations in auxin homeostasis.

Indexed as

ArabidopsisIndoleacetic AcidsPlant RootsSignal TransductionIndoleacetic AcidsAuxinAuxin signallingLateral rootsPrebranch sitesPrimingTemporal integration

Identifiers

PMID36314783
PMCPMC9793420

What Socratic holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the Socratic graph.