Evidence map›Paper›PMID 36329530›Full record

ArticleClinical epigenetics2022

Whole blood methylome-derived features to discriminate endocrine hypertension.

Roberta Armignacco, Parminder S Reel, Smarti Reel, Anne Jouinot, Amandine Septier, Cassandra Gaspar, Karine Perlemoine, Casper K Larsen, Lucas Bouys, Leah Braun and 25 more

Open access · goldAbstract read
In one paragraph

Article in Clinical epigenetics, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 5 papers.

0numbers the graph read from it
0cells of the map it votes in
5citing papers in PubMed
1.1field-weighted citation impact, top 20% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

5 citing papers in PubMed, 9 citations in OpenAlex.

  1. Review
  2. Review
  3. Article
  4. Renal Hypokalemia: An Endocrine Perspective.The Journal of clinical endocrinology and metabolism · 2024
    Review
  5. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

35 authors at 15 institutions in 6 countries.

Roberta Armignacco *Université Paris Cité, CNRS, INSERM, Institut Cochin, F-75014, Paris, France. roberta.armignacco@inserm.fr.
Parminder S Reel *Division of Population Health and Genomics, School of Medicine, University of Dundee, Dundee, DD2 4BF, UK.
Smarti Reel *Division of Population Health and Genomics, School of Medicine, University of Dundee, Dundee, DD2 4BF, UK.
Anne Jouinot *Université Paris Cité, CNRS, INSERM, Institut Cochin, F-75014, Paris, France.
Amandine SeptierUniversité Paris Cité, CNRS, INSERM, Institut Cochin, F-75014, Paris, France.
Cassandra GasparSorbonne Université, INSERM, UMS Production et Analyse de données en Sciences de la vie et en Santé, PASS, Plateforme Post-génomique de la Pitié-Salpêtrière, P3S, 75013, Paris, France.
Karine PerlemoineUniversité Paris Cité, CNRS, INSERM, Institut Cochin, F-75014, Paris, France.
Casper K LarsenUniversité Paris Cité, Inserm, PARCC, F-75015, Paris, France.
Lucas BouysUniversité Paris Cité, CNRS, INSERM, Institut Cochin, F-75014, Paris, France.
Leah BraunMedizinische Klinik und Poliklinik IV, Klinikum der Universität, Ludwig-Maximilians-Universität München, Munich, Germany.
Anna RiesterMedizinische Klinik und Poliklinik IV, Klinikum der Universität, Ludwig-Maximilians-Universität München, Munich, Germany.
Matthias KroissMedizinische Klinik und Poliklinik IV, Klinikum der Universität, Ludwig-Maximilians-Universität München, Munich, Germany.
Fidéline Bonnet-SerranoUniversité Paris Cité, CNRS, INSERM, Institut Cochin, F-75014, Paris, France.
Laurence AmarUniversité Paris Cité, Inserm, PARCC, F-75015, Paris, France.
Anne BlanchardCentre d'Investigations Cliniques 9201, AP-HP, Hôpital Européen Georges Pompidou, F-75015, Paris, France.
Anne-Paule Gimenez-RoqueploUniversité Paris Cité, Inserm, PARCC, F-75015, Paris, France.
Aleksander PrejbiszDepartment of Hypertension, Institute of Cardiology, Warsaw, Poland.
Andrzej JanuszewiczDepartment of Hypertension, Institute of Cardiology, Warsaw, Poland.
Piotr DobrowolskiDepartment of Hypertension, Institute of Cardiology, Warsaw, Poland.
Eleanor DaviesBHF Glasgow Cardiovascular Research Centre, Institute of Cardiovascular and Medical Sciences, University of Glasgow, Glasgow, G12 8TA, UK.
Scott M MacKenzieBHF Glasgow Cardiovascular Research Centre, Institute of Cardiovascular and Medical Sciences, University of Glasgow, Glasgow, G12 8TA, UK.
Gian Paolo RossiDepartment of Medicine-DIMED, Emergency and Hypertension Unit, University of Padova, University Hospital, Padua, Italy.
Livia LenziniDepartment of Medicine-DIMED, Emergency and Hypertension Unit, University of Padova, University Hospital, Padua, Italy.
Filippo CeccatoUOC Endocrinologia, Dipartimento di Medicina DIMED, Azienda Ospedaliera-Università di Padova, Padua, Italy.
Carla ScaroniUOC Endocrinologia, Dipartimento di Medicina DIMED, Azienda Ospedaliera-Università di Padova, Padua, Italy.
Paolo MulateroDivision of Internal Medicine and Hypertension Unit, Department of Medical Sciences, University of Torino, Turin, Italy.
Tracy A WilliamsDivision of Internal Medicine and Hypertension Unit, Department of Medical Sciences, University of Torino, Turin, Italy.
Alessio PecoriDivision of Internal Medicine and Hypertension Unit, Department of Medical Sciences, University of Torino, Turin, Italy.
Silvia MonticoneDivision of Internal Medicine and Hypertension Unit, Department of Medical Sciences, University of Torino, Turin, Italy.
Felix BeuschleinMedizinische Klinik und Poliklinik IV, Klinikum der Universität, Ludwig-Maximilians-Universität München, Munich, Germany.
Martin ReinckeMedizinische Klinik und Poliklinik IV, Klinikum der Universität, Ludwig-Maximilians-Universität München, Munich, Germany.
Maria-Christina ZennaroUniversité Paris Cité, Inserm, PARCC, F-75015, Paris, France.
Jérôme BertheratUniversité Paris Cité, CNRS, INSERM, Institut Cochin, F-75014, Paris, France.
Emily JeffersonDivision of Population Health and Genomics, School of Medicine, University of Dundee, Dundee, DD2 4BF, UK.
Guillaume AssiéUniversité Paris Cité, CNRS, INSERM, Institut Cochin, F-75014, Paris, France. guillaume.assie@aphp.fr.
Inserm · FRUniversity of Padua · ITUniversity of Turin · ITInstitute of Cardiology · PLLudwig-Maximilians-Universität München · DEUniversity of Glasgow · GBInstitut Cochin · FRLMU Klinikum · DEUniversité Paris Cité · FRCentre National de la Recherche Scientifique · FRGenomics (United Kingdom) · GBHôpital Cochin · FRHôpital Européen · FRSorbonne Université · FRUniversity of Dundee · GB

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

backgroundArterial hypertension represents a worldwide health burden and a major risk factor for cardiovascular morbidity and mortality. Hypertension can be primary (primary hypertension, PHT), or secondary to endocrine disorders (endocrine hypertension, EHT), such as Cushing's syndrome (CS), primary aldosteronism (PA), and pheochromocytoma/paraganglioma (PPGL). Diagnosis of EHT is currently based on hormone assays. Efficient detection remains challenging, but is crucial to properly orientate patients for diagnostic confirmation and specific treatment. More accurate biomarkers would help in the diagnostic pathway. We hypothesized that each type of endocrine hypertension could be associated with a specific blood DNA methylation signature, which could be used for disease discrimination. To identify such markers, we aimed at exploring the methylome profiles in a cohort of 255 patients with hypertension, either PHT (n = 42) or EHT (n = 213), and at identifying specific discriminating signatures using machine learning approaches.

resultsUnsupervised classification of samples showed discrimination of PHT from EHT. CS patients clustered separately from all other patients, whereas PA and PPGL showed an overall overlap. Global methylation was decreased in the CS group compared to PHT. Supervised comparison with PHT identified differentially methylated CpG sites for each type of endocrine hypertension, showing a diffuse genomic location. Among the most differentially methylated genes, FKBP5 was identified in the CS group. Using four different machine learning methods-Lasso (Least Absolute Shrinkage and Selection Operator), Logistic Regression, Random Forest, and Support Vector Machine-predictive models for each type of endocrine hypertension were built on training cohorts (80% of samples for each hypertension type) and estimated on validation cohorts (20% of samples for each hypertension type). Balanced accuracies ranged from 0.55 to 0.74 for predicting EHT, 0.85 to 0.95 for predicting CS, 0.66 to 0.88 for predicting PA, and 0.70 to 0.83 for predicting PPGL.

conclusionsThe blood DNA methylome can discriminate endocrine hypertension, with methylation signatures for each type of endocrine disorder.

Indexed as

Adrenal Gland NeoplasmsHypertensionPheochromocytomaBiomarkersDNA MethylationEpigenomeHumansBiomarkersCirculating biomarkerEndocrine hypertensionWhole blood methylome

Identifiers

PMID36329530
PMCPMC9635165
OpenAlexW4308017627

What Socratic holds

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LicenceCC BY
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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the Socratic graph.