Evidence map›Paper›PMID 36342187›Full record

ArticleG3 (Bethesda, Md.)2023

Multiomics analysis of the mechanisms behind flavonoid differences between purple and green tender shoots of Camellia sinensis var. assamica.

Zhi-Wei Liu, Xing-Yun Shi, Shuang-Mei Duan, Bo Nian, Li-Jiao Chen, Guang-Hui Zhang, Cai-You Lv, Yan Ma, Ming Zhao

Abstract read
In one paragraph

Article in G3 (Bethesda, Md.), 2023. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 5 papers.

0numbers the graph read from it
0cells of the map it votes in
5citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

5 citing papers in PubMed.

  1. Article
  2. Article
  3. Review
  4. Article
  5. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors.

Zhi-Wei LiuCollege of Tea Science, State Key Laboratory of Conservation and Utilization of Bio-resources in Yunnan, and National & Local Joint Engineering Research Center on Germplasm Innovation & Utilization of Chinese Medicinal Materials in Southwest China, Yunnan Agricultural University, Kunming, Yunnan 650201, China.ORCID 0000-0001-9842-9072
Xing-Yun ShiCollege of Tea Science, State Key Laboratory of Conservation and Utilization of Bio-resources in Yunnan, and National & Local Joint Engineering Research Center on Germplasm Innovation & Utilization of Chinese Medicinal Materials in Southwest China, Yunnan Agricultural University, Kunming, Yunnan 650201, China.
Shuang-Mei DuanTea Technique Extension Station of the Agriculture Bureau of Dehong, Yunnan 678400, China.
Bo NianCollege of Tea Science, State Key Laboratory of Conservation and Utilization of Bio-resources in Yunnan, and National & Local Joint Engineering Research Center on Germplasm Innovation & Utilization of Chinese Medicinal Materials in Southwest China, Yunnan Agricultural University, Kunming, Yunnan 650201, China.
Li-Jiao ChenCollege of Tea Science, State Key Laboratory of Conservation and Utilization of Bio-resources in Yunnan, and National & Local Joint Engineering Research Center on Germplasm Innovation & Utilization of Chinese Medicinal Materials in Southwest China, Yunnan Agricultural University, Kunming, Yunnan 650201, China.ORCID 0000-0002-5462-800X
Guang-Hui ZhangCollege of Tea Science, State Key Laboratory of Conservation and Utilization of Bio-resources in Yunnan, and National & Local Joint Engineering Research Center on Germplasm Innovation & Utilization of Chinese Medicinal Materials in Southwest China, Yunnan Agricultural University, Kunming, Yunnan 650201, China.ORCID 0000-0002-1905-6069
Cai-You LvCollege of Tea Science, State Key Laboratory of Conservation and Utilization of Bio-resources in Yunnan, and National & Local Joint Engineering Research Center on Germplasm Innovation & Utilization of Chinese Medicinal Materials in Southwest China, Yunnan Agricultural University, Kunming, Yunnan 650201, China.
Yan MaCollege of Tea Science, State Key Laboratory of Conservation and Utilization of Bio-resources in Yunnan, and National & Local Joint Engineering Research Center on Germplasm Innovation & Utilization of Chinese Medicinal Materials in Southwest China, Yunnan Agricultural University, Kunming, Yunnan 650201, China.ORCID 0000-0002-9142-8138
Ming ZhaoCollege of Tea Science, State Key Laboratory of Conservation and Utilization of Bio-resources in Yunnan, and National & Local Joint Engineering Research Center on Germplasm Innovation & Utilization of Chinese Medicinal Materials in Southwest China, Yunnan Agricultural University, Kunming, Yunnan 650201, China.ORCID 0000-0001-5611-9842

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Flavonoids are rich in tea plants (Camellia sinensis), and responsible for the flavor and healthful benefits of tea beverage. The anthocyanin levels in the purple tender shoots are higher than in the general green leaves of tea plant, which provide special materials to search metabolic mechanisms of flavonoid enrichment in plant. In this work, flavonoid differences between purple and green shoots from tea cultivars "Zijuan" (ZJ) and "Yunkang10" (YK-10) were investigated through metabolomic analysis, and mechanisms for their difference were surveyed by comparative transcriptomic and proteomic analysis. Levels of 34 flavonoids were different between ZJ and YK-10 shoots. Among them, 8 and 6 were marker metabolites in ZJ and YK-10, respectively. The differentially expressed genes (DEGs), differentially expressed proteins (DEPs), and different-level metabolites (DLMs) between ZJ and YK-10 were researched, respectively; and interactions including DEG-DLM, DEP-DLM, DEG-DEP, and DEG-DEP-DLM were analyzed; the contents of 18 characteristic flavonoids in tea leaves and expressions of 34 flavonoid metabolic genes were measured to verify the omics results. Integrated above analyses, a proposed model of flavonoids biosynthesis in tea shoots were established. The differential expression of the leucoanthocyanidin reductase (LAR), anthocyanidin synthase (ANS), anthocyanidin reductase (ANR), UDPG-flavonoid glucosyltransferase (UGT) 75L12 and 94P1 at gene level, and the ANS, ANR, and UGT78A15 at protein level, were closely associated with differences in flavonoids between ZJ and YK-10 shoot. Together, this study provides new information on the flavonoid accumulation mechanism in tea plant.

Indexed as

Camellia sinensisAnthocyaninsFlavonoidsGene Expression Regulation, PlantMultiomicsOxidoreductasesPlant LeavesPlant ProteinsProteomicsTeaTranscriptomeAnthocyaninsFlavonoidsOxidoreductasesPlant ProteinsTeaflavonoidsmetabolomeproteometea planttranscriptome

Identifiers

PMID36342187
PMCPMC9911070

What Socratic holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the Socratic graph.