Evidence map›Paper›PMID 36345244›Full record

ArticleCurrent pharmaceutical design2022

Current Insights and Molecular Docking Studies of the Drugs under Clinical Trial as RdRp Inhibitors in COVID-19 Treatment.

Irine Pauly, Ankit Kumar Singh, Adarsh Kumar, Yogesh Singh, Suresh Thareja, Mohammad A Kamal, Amita Verma, Pradeep Kumar

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Article in Current pharmaceutical design, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 7 papers.

0numbers the graph read from it
0cells of the map it votes in
7citing papers in PubMed
2.0field-weighted citation impact, top 12% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

7 citing papers in PubMed, 13 citations in OpenAlex.

  1. Article
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  4. Citric acid based (CQDs/TiODiscover nano · 2024
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors at 3 institutions in 2 countries.

Irine PaulyDepartment of Pharmaceutical Sciences and Natural Products, Central University of Punjab, Bathinda, 151401, India.
Ankit Kumar SinghDepartment of Pharmaceutical Sciences and Natural Products, Central University of Punjab, Bathinda, 151401, India.
Adarsh KumarDepartment of Pharmaceutical Sciences and Natural Products, Central University of Punjab, Bathinda, 151401, India.
Yogesh SinghDepartment of Pharmaceutical Sciences and Natural Products, Central University of Punjab, Bathinda, 151401, India.
Suresh TharejaDepartment of Pharmaceutical Sciences and Natural Products, Central University of Punjab, Bathinda, 151401, India.
Mohammad A KamalKing Fahd Medical Research Center, King Abdulaziz University, Jaddah, Saudi Arabia.
Amita VermaBioorganic and Medicinal Chemistry Research Laboratory, Department of Pharmaceutical Sciences, Sam Higginbottom University of Agriculture, Technology and Sciences, Prayagraj, 211007, India.
Pradeep KumarDepartment of Pharmaceutical Sciences and Natural Products, Central University of Punjab, Bathinda, 151401, India.
Central University of Punjab · INKing Abdulaziz University · SASam Higginbottom Institute of Agriculture · IN

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Study Background & Objective: After the influenza pandemic (1918), COVID-19 was declared a Vth pandemic by the WHO in 2020. SARS-CoV-2 is an RNA-enveloped single-stranded virus. Based on the structure and life cycle, Protease (3CLpro), RdRp, ACE2, IL-6, and TMPRSS2 are the major targets for drug development against COVID-19. Pre-existing several drugs (FDA-approved) are used to inhibit the above targets in different diseases. In coronavirus treatment, these drugs are also in different clinical trial stages. Remdesivir (RdRp inhibitor) is the only FDA-approved medicine for coronavirus treatment. In the present study, by using the drug repurposing strategy, 70 preexisting clinical or under clinical trial molecules were used in scrutiny for RdRp inhibitor potent molecules in coronavirus treatment being surveyed via docking studies. Molecular simulation studies further confirmed the binding mechanism and stability of the most potent compounds. MATERIAL AND

methodsDocking studies were performed using the Maestro 12.9 module of Schrodinger software over 70 molecules with RdRp as the target and remdesivir as the standard drug and further confirmed by simulation studies.

resultsThe docking studies showed that many HIV protease inhibitors demonstrated remarkable binding interactions with the target RdRp. Protease inhibitors such as lopinavir and ritonavir are effective. Along with these, AT-527, ledipasvir, bicalutamide, and cobicistat showed improved docking scores. RMSD and RMSF were further analyzed for potent ledipasvir and ritonavir by simulation studies and were identified as potential candidates for corona disease.

conclusionThe drug repurposing approach provides a new avenue in COVID-19 treatment.

Indexed as

COVID-19COVID-19 Drug TreatmentRNA-Dependent RNA PolymeraseAntiviral AgentsBenzimidazolesFluorenesHumansMolecular Docking SimulationMolecular Dynamics SimulationRitonavirSARS-CoV-2Antiviral AgentsBenzimidazolesFluorenesledipasvirRitonavirRNA-Dependent RNA PolymeraseCOVID-19docking and simulation.life cycleRdRpremdesivirSARS-CoV-2

Identifiers

PMID36345244
OpenAlexW4308550544

What Socratic holds

Textmetadata
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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the Socratic graph.