Evidence map›Paper›PMID 36346914›Full record

ArticleACS synthetic biology2022

Genome-Wide Screen for Enhanced Noncanonical Amino Acid Incorporation in Yeast.

Matthew T Zackin, Jessica T Stieglitz, James A Van Deventer

Abstract read
In one paragraph

Article in ACS synthetic biology, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 7 papers.

0numbers the graph read from it
0cells of the map it votes in
7citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

7 citing papers in PubMed.

  1. Article
  2. Review
  3. Review
  4. Article
  5. Evolution and synthetic biology.Current opinion in microbiology · 2023
    Review
  6. Article
  7. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

3 authors.

Matthew T ZackinChemical and Biological Engineering Department, Tufts University, Medford, Massachusetts 02155, United States.
Jessica T StieglitzChemical and Biological Engineering Department, Tufts University, Medford, Massachusetts 02155, United States.ORCID 0000-0003-3845-0712
James A Van DeventerChemical and Biological Engineering Department, Tufts University, Medford, Massachusetts 02155, United States.ORCID 0000-0003-4343-6157

Funding

The yeast surface as a platform for inhibitor discoveryR35GM133471 · NIGMS · TUFTS UNIVERSITY MEDFORD · PI James Allen Van Deventer · 2019 to 2026
$3.1M
NIGMS NIH HHS R35 GM133471
6 · The paper itself

Abstract

Numerous applications of noncanonical amino acids (ncAAs) in basic biology and therapeutic development require efficient protein biosynthesis using an expanded genetic code. However, achieving such incorporation at repurposed stop codons in cells is generally inefficient and limited by complex cellular processes that preserve the fidelity of protein synthesis. A more comprehensive understanding of the processes that contribute to ncAA incorporation would aid in the development of genomic engineering strategies for augmenting genetic code manipulation. In this work, we used a series of fluorescent reporters to screen a pooled

Indexed as

Amino AcidsAmino Acyl-tRNA SynthetasesCodon, TerminatorGenetic CodeProteinsRNA, TransferSaccharomyces cerevisiaeAmino AcidsAmino Acyl-tRNA SynthetasesCodon, TerminatorProteinsRNA, Transferamber suppressionaminoacyl-tRNA synthetasesfluorescence-activated cell sortingnoncanonical amino acidsyeast knockout collection

Identifiers

PMID36346914
PMCPMC10065164

What Socratic holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the Socratic graph.