Evidence map›Paper›PMID 36355294›Full record

ArticleMethods in molecular biology (Clifton, N.J.)2023

Modulation of MicroRNA Expression During In Vitro Chondrogenesis.

Austin Bell-Hensley, Hongjun Zheng, Audrey McAlinden

Open access · greenAbstract read
In one paragraph

Article in Methods in molecular biology (Clifton, N.J.), 2023. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 1 paper.

0numbers the graph read from it
0cells of the map it votes in
1citing papers in PubMed
0.5field-weighted citation impact, top 28% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

1 citing paper in PubMed, 1 citations in OpenAlex.

  1. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

3 authors at 1 institution in 1 country.

Austin Bell-Hensley *Department of Biomedical Engineering, Washington University, St Louis, MO, USA.
Hongjun Zheng *Department of Orthopaedic Surgery, Washington University School of Medicine, St Louis, MO, USA.
Audrey McAlindenDepartment of Orthopaedic Surgery, Washington University School of Medicine, St Louis, MO, USA. mcalindena@wustl.edu.
Washington University in St. Louis · US

Funding

MicroRNA regulation of bone formation and repairR01AR075730 · NIAMS · WASHINGTON UNIVERSITY · PI MCALINDEN, AUDREY · 2020 to 2024
$2.4M
Targeting MicroRNAs for Osteochondral Tissue EngineeringR21AR077203 · NIAMS · WASHINGTON UNIVERSITY · PI GUILAK, FARSHID, MCALINDEN, AUDREY · 2020 to 2021
$376k
NIAMS NIH HHS R01 AR075730NIAMS NIH HHS R21 AR077203
6 · The paper itself

Abstract

Since their discovery in 1993, microRNAs (miRNAs) are now recognized as important epigenetic regulators of many mammalian cellular processes including proliferation, apoptosis, metabolism, and differentiation. These small non-coding RNAs function by interacting with specific regions in the 3'-untranslated region of mRNAs, thereby resulting in mRNA degradation or suppression of translation. Since miRNAs have the ability to target many mRNAs within a given cell type, a number of cellular pathways and networks may be regulated as a result. To study the function of miRNAs, a number of methods can be used to modulate their activity in cells such as synthetic mimics or antagomirs for short-term assays or viral-based approaches for longer-term experiments such as cell differentiation assays. In this chapter, we provide our methodology to constitutively overexpress a desired miRNA during in vitro chondrogenesis of human cartilage progenitor cells (CPCs). Specifically, we describe how we obtain CPCs from human articular cartilage specimens, how we generate and titrate lentivirus engineered to overexpress a precursor miRNA, how we transduce CPCs with lentivirus and differentiate them toward the chondrocyte lineage, and how we extract RNA and measure expression levels of the miRNA of interest during in vitro chondrogenesis. We also provide some data from our laboratory demonstrating that we can achieve and maintain miRNA overexpression for up to 14 days in cartilage pellet cultures. We predict that these lentiviral-based approaches will also be useful to study how miRNA modulation of progenitor cells affects cell differentiation and extracellular matrix production within three-dimensional biomaterial scaffolds.

Indexed as

Cartilage, ArticularMicroRNAs3' Untranslated RegionsAnimalsCell DifferentiationChondrocytesChondrogenesisHumansMammalsRNA, Messenger3' Untranslated RegionsMicroRNAsRNA, MessengerCartilageChondrocyteChondrogenesisDifferentiationLentivirusMicroRNAmiRNAProgenitor cell

Identifiers

PMID36355294
PMCPMC10069062
OpenAlexW4308861762

What Socratic holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the Socratic graph.