Evidence map›Paper›PMID 36389771›Full record

ArticleFrontiers in immunology2022

Combined unsupervised and semi-automated supervised analysis of flow cytometry data reveals cellular fingerprint associated with newly diagnosed pediatric type 1 diabetes.

Camillo Bechi Genzano, Eugenia Bezzecchi, Debora Carnovale, Alessandra Mandelli, Elisa Morotti, Valeria Castorani, Valeria Favalli, Angela Stabilini, Vittoria Insalaco, Francesca Ragogna and 12 more

Open access · goldAbstract read
In one paragraph

Article in Frontiers in immunology, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 9 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
9citing papers in PubMed, 1 pooled it
2.1field-weighted citation impact, top 12% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

9 citing papers in PubMed, 1 synthesis or guideline pooled it, 12 citations in OpenAlex.

  1. Pooled it
  2. Review
  3. Article
  4. Article
  5. Article
  6. Review
  7. Article
  8. Article
  9. Observational
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

22 authors at 2 institutions in 1 country.

Camillo Bechi GenzanoDiabetes Research Institute, IRCCS Ospedale San Raffaele, Milan, Italy.
Eugenia BezzecchiDiabetes Research Institute, IRCCS Ospedale San Raffaele, Milan, Italy.
Debora CarnovaleDiabetes Research Institute, IRCCS Ospedale San Raffaele, Milan, Italy.
Alessandra MandelliDiabetes Research Institute, IRCCS Ospedale San Raffaele, Milan, Italy.
Elisa MorottiDiabetes Research Institute, IRCCS Ospedale San Raffaele, Milan, Italy.
Valeria CastoraniDiabetes Research Institute, IRCCS Ospedale San Raffaele, Milan, Italy.
Valeria FavalliDiabetes Research Institute, IRCCS Ospedale San Raffaele, Milan, Italy.
Angela StabiliniDiabetes Research Institute, IRCCS Ospedale San Raffaele, Milan, Italy.
Vittoria InsalacoDiabetes Research Institute, IRCCS Ospedale San Raffaele, Milan, Italy.
Francesca RagognaDiabetes Research Institute, IRCCS Ospedale San Raffaele, Milan, Italy.
Valentina CodazziDiabetes Research Institute, IRCCS Ospedale San Raffaele, Milan, Italy.
Giulia Maria ScottiDiabetes Research Institute, IRCCS Ospedale San Raffaele, Milan, Italy.
Stefania Del RossoLaboratory Medicine, Autoimmunity Section, IRCCS Ospedale San Raffaele, Milan, Italy.
Benedetta Allegra MazziImmuno-Hematology and Transfusion Medicine (ITMS), IRCCS Ospedale San Raffaele, Milan, Italy.
Maurizio De PellegrinPediatric Orthopedic and Traumatology Unit, IRCCS Ospedale San Raffaele, Milan, Italy.
Andrea GiustinaInstitute of Endocrine and Metabolic Sciences, IRCCS Ospedale San Raffaele, Milan, Italy.
Lorenzo PiemontiDiabetes Research Institute, IRCCS Ospedale San Raffaele, Milan, Italy.
Emanuele BosiDiabetes Research Institute, IRCCS Ospedale San Raffaele, Milan, Italy.
Manuela BattagliaDiabetes Research Institute, IRCCS Ospedale San Raffaele, Milan, Italy.
Marco J MorelliCenter for Omics Sciences, IRCCS Ospedale San Raffaele, Milan, Italy.
Riccardo BonfantiDiabetes Research Institute, IRCCS Ospedale San Raffaele, Milan, Italy.
Alessandra PetrelliDiabetes Research Institute, IRCCS Ospedale San Raffaele, Milan, Italy.
IRCCS Ospedale San Raffaele · ITVita-Salute San Raffaele University · IT

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

An unbiased and replicable profiling of type 1 diabetes (T1D)-specific circulating immunome at disease onset has yet to be identified due to experimental and patient selection limitations. Multicolor flow cytometry was performed on whole blood from a pediatric cohort of 107 patients with new-onset T1D, 85 relatives of T1D patients with 0-1 islet autoantibodies (pre-T1D_LR), 58 patients with celiac disease or autoimmune thyroiditis (CD_THY) and 76 healthy controls (HC). Unsupervised clustering of flow cytometry data, validated by a semi-automated gating strategy, confirmed previous findings showing selective increase of naïve CD4 T cells and plasmacytoid DCs, and revealed a decrease in CD56

Indexed as

Diabetes Mellitus, Type 1AutoantibodiesChildFlow CytometryHumansKiller Cells, NaturalT-Lymphocytes, RegulatoryAutoantibodiescomputational biologyfingerprintsflow cytometryimmune markerspediatric diabetestype 1 diabetes

Identifiers

PMID36389771
PMCPMC9647173
OpenAlexW4307635380

What Socratic holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the Socratic graph.