Evidence map›Paper›PMID 36400570›Full record

ArticleNucleic acids research2022

Structural and dynamic basis of DNA capture and translocation by mitochondrial Twinkle helicase.

Zhuo Li, Parminder Kaur, Chen-Yu Lo, Neil Chopra, Jamie Smith, Hong Wang, Yang Gao

Open access · goldAbstract read
In one paragraph

Article in Nucleic acids research, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 10 papers.

0numbers the graph read from it
0cells of the map it votes in
10citing papers in PubMed
1.0field-weighted citation impact, top 26% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

10 citing papers in PubMed, 12 citations in OpenAlex.

  1. Review
  2. Review
  3. Article
  4. The First HeterozygousBiomolecules · 2025
    Article
  5. Article
  6. Article
  7. Article
  8. Twinkle-Catalyzed Toehold-Mediated DNA Strand Displacement Reaction.Journal of the American Chemical Society · 2023
    Article
  9. Review
  10. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors at 2 institutions in 1 country.

Zhuo LiBioSciences Department, Rice University, Houston, TX 77005, USA.ORCID 0000-0003-3453-5903
Parminder KaurPhysics Department, North Carolina State University, Raleigh, NC 27695, USA.
Chen-Yu LoBioSciences Department, Rice University, Houston, TX 77005, USA.
Neil ChopraBioSciences Department, Rice University, Houston, TX 77005, USA.
Jamie SmithBioSciences Department, Rice University, Houston, TX 77005, USA.
Hong WangPhysics Department, North Carolina State University, Raleigh, NC 27695, USA.
Yang GaoBioSciences Department, Rice University, Houston, TX 77005, USA.ORCID 0000-0002-4037-0431
Rice University · USNorth Carolina State University · US

Funding

Translational Research Support CoreP30ES025128 · NIEHS · NORTH CAROLINA STATE UNIVERSITY RALEIGH · PI Sue Fenton · 2015 to 2026
$18.3M
Structural basis of replisome mediated DNA replication and repairR35GM142722 · NIGMS · RICE UNIVERSITY · PI GAO, YANG · 2021 to 2025
$1.9M
Sequence and Structure Specific DNA Binding by Cohesin and Genome StabilityR01GM123246 · NIGMS · NORTH CAROLINA STATE UNIVERSITY RALEIGH · PI WANG, HONG · 2018 to 2021
$1.2M
NIEHS NIH HHS P30 ES025128NIGMS NIH HHS R01 GM123246NIGMS NIH HHS R35 GM142722
6 · The paper itself

Abstract

Twinkle is a mitochondrial replicative helicase which can self-load onto and unwind mitochondrial DNA. Nearly 60 mutations on Twinkle have been linked to human mitochondrial diseases. Using cryo-electron microscopy (cryo-EM) and high-speed atomic force microscopy (HS-AFM), we obtained the atomic-resolution structure of a vertebrate Twinkle homolog with DNA and captured in real-time how Twinkle is self-loaded onto DNA. Our data highlight the important role of the non-catalytic N-terminal domain of Twinkle. The N-terminal domain directly contacts the C-terminal helicase domain, and the contact interface is a hotspot for disease-related mutations. Mutations at the interface destabilize Twinkle hexamer and reduce helicase activity. With HS-AFM, we observed that a highly dynamic Twinkle domain, which is likely to be the N-terminal domain, can protrude ∼5 nm to transiently capture nearby DNA and initialize Twinkle loading onto DNA. Moreover, structural analysis and subunit doping experiments suggest that Twinkle hydrolyzes ATP stochastically, which is distinct from related helicases from bacteriophages.

Indexed as

DNA HelicasesMitochondrial ProteinsCryoelectron MicroscopyDNA, MitochondrialDNA ReplicationHumansMitochondriaDNA HelicasesDNA, MitochondrialMitochondrial Proteins

Identifiers

PMID36400570
PMCPMC9723800
OpenAlexW4309413498

What Socratic holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the Socratic graph.